myRT

myRT report for GCA_008012415.1_ASM801241v1

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Seq: SSER01000080.1 Burkholderiaceae bacterium isolate Bin_27_2 c_000000050176, whole genome shotgun sequence (36055 bp)
Overview 1 RT 1: 30461-34629 bp Neighborhood of RT #1 [30461, 34634] pfam03781 Avd_like RVT-DGRs lyz_endolysin_autolysin Feature: gene Location: 30461-31534 bp Feature: domain Description: pfam03781 Location: 30776-31052 bp Feature: domain Description: pfam03781 Location: 30776-31 052 bp Feature: gene Location: 31586-31981 bp Feature: domain Description: Avd_like Location: 31643-31949 bp Feature: domain Description: Avd_like Location: 31 643-31 949 bp Feature: gene Location: 32272-33378 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32482-33178 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 32482-331 78 bp Feature: gene Location: 33676-34176 bp Feature: gene Location: 34173-34634 bp Feature: domain Description: lyz_endolysin_autolysin Location: 34197-34629 bp Feature: domain Description: lyz_endolysin_autolysin Location: 341 97-34629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), Avd_like (cd16376), RVT-DGRs, lyz_endolysin_autolysin (cd00737)

Seq: SSER01000116.1 Burkholderiaceae bacterium isolate Bin_27_2 c_000000060633, whole genome shotgun sequence (8783 bp)
Overview 1 RT 1: 70-4033 bp Neighborhood of RT #1 [70, 4161] DEDDh RVT-GII GIIM GDPD_ScGlpQ1_like Feature: gene Location: 70-558 bp Feature: domain Description: DEDDh Location: 91-535 bp Feature: domain Description: DEDDh Location: 91-535 bp Feature: gene Location: 646-1797 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 763-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 763-1378 bp Feature: domain Description: GIIM Note: maturase Location: 1435-1636 bp Feature: domain Description: GIIM Note: maturase Location: 1435-1636 bp Feature: gene Location: 2515-2709 bp Feature: gene Location: 2923-4161 bp Feature: domain Description: GDPD_ScGlpQ1_like Location: 3034-4033 bp Feature: domain Description: GDPD_ScGlpQ1_like Location: 3034-4033 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GDPD_ScGlpQ1_like (cd08602), RVT-GII, GIIM (pfam08388), DEDDh (cd06127)

Seq: SSER01000097.1 Burkholderiaceae bacterium isolate Bin_27_2 c_000000095498, whole genome shotgun sequence (16140 bp)
Overview 1 RT 1: 2962-7682 bp Neighborhood of RT #1 [2962, 7828] IS285 group_II_RT_mat RVT-GII PIN_12 Transposase_mut Feature: gene Location: 2962-3120 bp Feature: gene Location: 3163-4389 bp Feature: domain Description: IS285 Location: 3220-4381 bp Feature: domain Description: IS285 Location: 3 220-43 81 bp Feature: gene Location: 4591-5490 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4702-4858 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 4702-4858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4867-5344 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4867-53 44 bp Feature: gene Location: 5727-6737 bp Feature: domain Description: PIN_12 Location: 5736-6198 bp Feature: domain Description: PIN_12 Location: 573 6-6198 bp Feature: gene Location: 7103-7828 bp Feature: domain Description: Transposase_mut Location: 7148-7682 bp Feature: domain Description: Transposase_mut Location: 7148-7682 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS285 (COG3328), group_II_RT_mat (TIGR04416), RVT-GII, PIN_12, Transposase_mut (pfam00872)