myRT

myRT report for GCA_008015155.1_ASM801515v1

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Seq: SSFA01000032.1 Thiothrix sp. isolate Bin_56_1 c_000000007388, whole genome shotgun sequence (67497 bp)
Overview 1 RT 1: 31981-36449 bp Neighborhood of RT #1 [31981, 36502] TIR_2 YfmG Avd_like RVT-DGRs DUF820 VapB_antitoxin Feature: gene Location: 31981-33651 bp Feature: domain Description: TIR_2 Location: 31993-32296 bp Feature: domain Description: TIR_2 Location: 31 993-32296 bp Feature: domain Description: YfmG Location: 32707-33640 bp Feature: domain Description: YfmG Location: 32707-33640 bp Feature: gene Location: 33771-34115 bp Feature: domain Description: Avd_like Location: 33804-34104 bp Feature: domain Description: Avd_like Location: 33804-341 04 bp Feature: gene Location: 34142-35173 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 34319-34964 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3431 9-34964 bp Feature: gene Location: 35538-36107 bp Feature: domain Description: DUF820 Location: 35607-36048 bp Feature: domain Description: DUF820 Location: 35607-36048 bp Feature: gene Location: 36293-36502 bp Feature: domain Description: VapB_antitoxin Location: 36314-36449 bp Feature: domain Description: VapB_antitoxin Location: 3631 4-36449 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIR_2 (pfam13676), YfmG (COG1262), Avd_like (cd16376), RVT-DGRs, DUF820, VapB_antitoxin (pfam09957)

Seq: SSFA01000016.1 Thiothrix sp. isolate Bin_56_1 c_000000102617, whole genome shotgun sequence (70532 bp)
Overview 1 RT 1: 40015-44419 bp Neighborhood of RT #1 [40015, 44419] AHP1 GlrX-dom PRK06116 RVT-G2L Feature: gene Location: 40015-40890 bp Feature: domain Description: AHP1 Location: 40168-40639 bp Feature: domain Description: AHP1 Location: 40168-40639 bp Feature: domain Description: GlrX-dom Location: 40645-40879 bp Feature: domain Description: GlrX-dom Location: 40645-40879 bp Feature: gene Location: 40965-42329 bp Feature: domain Description: PRK06116 Location: 40968-42327 bp Feature: domain Description: PRK06116 Location: 40968-42 32 7 bp Feature: gene Location: 42409-43635 bp Feature: RT Description: RVT-G2L Note: G2L RT Location: 42634-43285 bp Feature: RT Description: RVT-G2 L Note: G2 L RT Location: 42 634-432 85 bp Feature: gene Location: 43686-44060 bp Feature: gene Location: 44138-44419 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AHP1 (COG0678), GlrX-dom (TIGR02190), PRK06116 (glutathione reductase; Validated), RVT-G2L

Seq: SSFA01000013.1 Thiothrix sp. isolate Bin_56_1 c_000000118809, whole genome shotgun sequence (150994 bp)
Overview 1 RT 1: 91869-102703 bp Neighborhood of RT #1 [91869, 102714] WD40 WD40 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 HEAT_2 RVT-Retrons DUF4259 dCache_2 Feature: gene Location: 91869-98348 bp Feature: domain Description: WD40 Location: 92154-92484 bp Feature: domain Description: WD40 Location: 92154-92484 bp Feature: domain Description: WD40 Location: 92538-92787 bp Feature: domain Description: WD40 Location: 9253 8-92787 bp Feature: domain Description: HEAT_2 Location: 92832-93063 bp Feature: domain Description: HEAT_2 Location: 9283 2-93 063 bp Feature: domain Description: HEAT_2 Location: 93639-93885 bp Feature: domain Description: HEAT_2 Location: 93 63 9-93 885 bp Feature: domain Description: HEAT_2 Location: 94314-94563 bp Feature: domain Description: HEAT_2 Location: 943 14-94563 bp Feature: domain Description: HEAT_2 Location: 94755-94962 bp Feature: domain Description: HEAT_2 Location: 94755-94962 bp Feature: domain Description: HEAT_2 Location: 96021-96240 bp Feature: domain Description: HEAT_2 Location: 96021-96240 bp Feature: domain Description: HEAT_2 Location: 96729-96984 bp Feature: domain Description: HEAT_2 Location: 96729-96984 bp Feature: domain Description: HEAT_2 Location: 97065-97278 bp Feature: domain Description: HEAT_2 Location: 97065-97278 bp Feature: gene Location: 98345-100168 bp Feature: gene Location: 100172-101467 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 100625-101237 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 100625-10123 7 bp Feature: gene Location: 101471-101899 bp Feature: domain Description: DUF4259 Location: 101477-101858 bp Feature: domain Description: DUF4259 Location: 101477-101858 bp Feature: gene Location: 102202-102714 bp Feature: domain Description: dCache_2 Location: 102433-102703 bp Feature: domain Description: dCache_2 Location: 10243 3 -102703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WD40 (smart00320), HEAT_2 (pfam13646), RVT-Retrons, DUF4259 (pfam14078), dCache_2 (pfam08269)

Seq: SSFA01000023.1 Thiothrix sp. isolate Bin_56_1 c_000000146718, whole genome shotgun sequence (144260 bp)
Overview 1 RT 1: 40371-48129 bp Neighborhood of RT #1 [40371, 48129] RVT-Retrons WGR_DNA_ligase HEAT_2 Feature: gene Location: 40371-40649 bp Feature: gene Location: 40849-41028 bp Feature: gene Location: 41121-42800 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 41658-42273 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4 1658-4 2273 bp Feature: gene Location: 42797-46504 bp Feature: domain Description: WGR_DNA_ligase Location: 42815-43037 bp Feature: domain Description: WGR_DNA_ligase Location: 4 2815-4 3037 bp Feature: domain Description: HEAT_2 Location: 45344-45602 bp Feature: domain Description: HEAT_2 Location: 4 534 4 -4 5602 bp Feature: gene Location: 46504-48129 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646)