myRT

myRT report for GCA_008015685.1_ASM801568v1

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Seq: SSGB01000059.1 Mycobacterium sp. isolate Bin_1_1 c_000000018951, whole genome shotgun sequence (5338 bp)
Overview 1 RT 1: 287-5335 bp Neighborhood of RT #1 [287, 5337] HTH_28 rve RVT-GII Intron_maturas2 Mu-transpos_C ExeA Feature: gene Location: 287-913 bp Feature: gene Location: 963-1877 bp Feature: domain Description: HTH_28 Location: 1113-1218 bp Feature: domain Description: HTH_28 Location: 1 1 1 3-1 21 8 bp Feature: domain Description: rve Location: 1437-1758 bp Feature: domain Description: rve Location: 1 437-1 758 bp Feature: gene Location: 2289-4085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2550-3345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2550-3345 bp Feature: domain Description: Intron_maturas2 Location: 3483-3696 bp Feature: domain Description: Intron_maturas2 Location: 3483-3696 bp Feature: gene Location: 4133-4804 bp Feature: domain Description: Mu-transpos_C Location: 4421-4565 bp Feature: domain Description: Mu-transpos_C Location: 4421 -4565 bp Feature: gene Location: 4801-5337 bp Feature: domain Description: ExeA Location: 4813-5335 bp Feature: domain Description: ExeA Location: 481 3-5335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), ExeA (COG3267), HTH_28 (pfam13518), rve (pfam00665)

Seq: SSGB01000134.1 Mycobacterium sp. isolate Bin_1_1 c_000000045653, whole genome shotgun sequence (16557 bp)
Overview 1 RT 1: 7846-14057 bp Neighborhood of RT #1 [7846, 14137] Myco_19_kDa Tgt RVT-CRISPR-like RnaI Feature: gene Location: 7846-8346 bp Feature: domain Description: Myco_19_kDa Location: 8002-8341 bp Feature: domain Description: Myco_19_kDa Location: 8002 -8341 bp Feature: gene Location: 8478-9707 bp Feature: domain Description: Tgt Location: 8514-9702 bp Feature: domain Description: Tgt Location: 8514-9702 bp Feature: gene Location: 9856-11232 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10141-10762 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 10141-10762 bp Feature: gene Location: 11225-13285 bp Feature: gene Location: 13415-14137 bp Feature: domain Description: RnaI Location: 13487-14057 bp Feature: domain Description: RnaI Location: 13487-14057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RnaI (COG3719), Myco_19_kDa (pfam05481), Tgt (COG0343), RVT-CRISPR