myRT

myRT report for GCA_008016515.1_ASM801651v1

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Seq: SAXX01000022.1 Brachyspira aalborgi strain PC5538III-lc PC5538III-lc_contig22, whole genome shotgun sequence (263765 bp)
Overview 1 RT 1: 187068-193941 bp Neighborhood of RT #1 [187068, 194078] PRK00507 Eco57I Eco57I RVT-Retrons PDDEXK_2 Feature: gene Location: 187068-187718 bp Feature: domain Description: PRK00507 Location: 187074-187710 bp Feature: domain Description: PRK00507 Location: 1 87074-1 8771 0 bp Feature: gene Location: 187939-191646 bp Feature: domain Description: Eco57I Location: 190147-190453 bp Feature: domain Description: Eco57I Location: 1 901 47-1 90453 bp Feature: domain Description: Eco57I Location: 190594-190726 bp Feature: domain Description: Eco57I Location: 1 90594-1 90726 bp Feature: gene Location: 192063-192941 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 192222-192729 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 92222-1 92729 bp Feature: gene Location: 193077-193211 bp Feature: gene Location: 193233-194078 bp Feature: domain Description: PDDEXK_2 Location: 193260-193941 bp Feature: domain Description: PDDEXK_2 Location: 1 93260-1 93941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00507 (deoxyribose-phosphate aldolase; Provisional), Eco57I (pfam07669), RVT-Retrons, PDDEXK_2 (pfam12784)

Seq: SAXX01000003.1 Brachyspira aalborgi strain PC5538III-lc PC5538III-lc_contig3, whole genome shotgun sequence (131788 bp)
Overview 1 RT 1: 105513-113520 bp Neighborhood of RT #1 [105513, 113520] COG2810 N6_Mtase TaqI_C Hypoth_Ymh RVT-Retrons YjgR YjgR Feature: gene Location: 105513-108434 bp Feature: domain Description: COG2810 Location: 105570-106101 bp Feature: domain Description: COG2 810 Location: 105570-106101 bp Feature: domain Description: N6_Mtase Location: 106629-107565 bp Feature: domain Description: N6_Mtase Location: 10662 9-107565 bp Feature: domain Description: TaqI_C Location: 107826-108198 bp Feature: domain Description: TaqI_C Location: 10782 6-108198 bp Feature: gene Location: 108457-109260 bp Feature: domain Description: Hypoth_Ymh Location: 108862-109219 bp Feature: domain Description: Hypoth_Ymh Location: 108862 -1092 19 bp Feature: gene Location: 109273-110946 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109402-110017 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 109402 -110017 bp Feature: gene Location: 111542-112387 bp Feature: domain Description: YjgR Location: 111665-111791 bp Feature: domain Description: YjgR Location: 111665-111791 bp Feature: domain Description: YjgR Location: 111965-112325 bp Feature: domain Description: YjgR Location: 111965-112 32 5 bp Feature: gene Location: 112576-113520 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG2810 (Predicted type IV restriction endonuclease ), N6_Mtase (pfam02384), TaqI_C (pfam12950), Hypoth_Ymh (pfam09509), RVT-Retrons, YjgR (COG0433)