myRT

myRT report for GCA_008042345.1_ASM804234v1

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Seq: QNUB01000016.1 Bacillus sp. AR8-1 AR8-1_contig_16, whole genome shotgun sequence (341058 bp)
Overview 1 RT 1: 193597-199691 bp Neighborhood of RT #1 [193597, 200368] NTP-PPase_RS21-C6_like GIY-YIG_COG3410 DUF2075 RVT-Retrons DUF262 Feature: gene Location: 193597-193941 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 193621-193870 bp Feature: domain Description: NTP-PPase_RS21 -C6_like Location: 1 93621 -1 93870 bp Feature: gene Location: 193945-195687 bp Feature: domain Description: GIY-YIG_COG3410 Location: 194044-194269 bp Feature: domain Description: GIY-YIG_COG341 0 Location: 1 94044-1 94269 bp Feature: domain Description: DUF2075 Location: 194536-195622 bp Feature: domain Description: DUF2075 Location: 1 94536-1 95622 bp Feature: gene Location: 196538-198286 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 196664-197252 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 96664-1 97252 bp Feature: gene Location: 198735-199364 bp Feature: gene Location: 199364-200368 bp Feature: domain Description: DUF262 Location: 199400-199691 bp Feature: domain Description: DUF262 Location: 1 99400-1 99691 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NTP-PPase_RS21-C6_like (cd11537), GIY-YIG_COG3410 (cd10439), DUF2075 (pfam09848), RVT-Retrons, DUF262 (pfam03235)

Seq: QNUB01000017.1 Bacillus sp. AR8-1 AR8-1_contig_17, whole genome shotgun sequence (389948 bp)
Overview 1 RT 1: 360429-366481 bp Neighborhood of RT #1 [360429, 366501] PRK00148 PRK00024 RVT-GII HNHc PRK13927 PRK13922 Feature: gene Location: 360429-361004 bp Feature: domain Description: PRK00148 Location: 360438-360999 bp Feature: domain Description: PRK00148 Location: 360438-360999 bp Feature: gene Location: 361051-361692 bp Feature: domain Description: PRK00024 Location: 361063-361678 bp Feature: domain Description: PRK0002 4 Location: 361063-361678 bp Feature: gene Location: 362393-364267 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362714-363425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 362 714-36342 5 bp Feature: domain Description: HNHc Note: nucleases Location: 364019-364187 bp Feature: domain Description: HNHc Note: nucleases Location: 364019-364187 bp Feature: gene Location: 364589-365608 bp Feature: domain Description: PRK13927 Location: 364607-365597 bp Feature: domain Description: PRK1392 7 Location: 364607-365597 bp Feature: gene Location: 365650-366501 bp Feature: domain Description: PRK13922 Location: 365653-366481 bp Feature: domain Description: PRK1392 2 Location: 365653-366481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00148 (Maf-like protein; Reviewed), PRK00024 (DNA repair protein RadC), RVT-GII, HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional)