myRT

myRT report for GCA_008065115.1_ASM806511v1

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Seq: CP042913.1 Bythopirellula goksoyri strain Pr1d chromosome (6473141 bp)
Overview 1 RT 1: 794387-801811 bp 2 RT 2: 2478312-2482245 bp 3 RT 3: 3081394-3086552 bp 4 RT 4: 3623589-3627827 bp 5 RT 5: 3646481-3650727 bp 6 RT 6: 3806719-3813275 bp 7 RT 7: 3921274-3927825 bp 8 RT 8: 6198288-6203418 bp Neighborhood of RT #1 [794387, 801849] bioD RVT-GII GIIM RVT-GII GIIM Transposase_mut DUF1080 Neighborhood of RT #2 [2478312, 2482352] Sigma70_ECF RVT-GII RVT-GII GIIM AzoR Isochorismatase Neighborhood of RT #3 [3081394, 3086563] RVT-GII GIIM Transposase_mut GlpF Neighborhood of RT #4 [3623589, 3627827] RVT-GII GIIM Transposase_mut Neighborhood of RT #5 [3646481, 3650727] Transposase_mut RVT-GII GIIM Neighborhood of RT #6 [3806719, 3813275] RVT-UG1 Neighborhood of RT #7 [3921274, 3927825] CSLREA_Nterm DDE_Tnp_1_4 RVT-GII GIIM Neighborhood of RT #8 [6198288, 6204407] Ion_trans_2 RVT-GII GIIM STKc_PknB_like Feature: gene Location: 794387-795070 bp Feature: domain Description: bioD Location: 794402-795032 bp Feature: domain Description: bioD Location: 794402-795032 bp Feature: gene Location: 795455-795892 bp Feature: gene Location: 795941-797419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796307-796928 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 796307-796928 bp Feature: domain Description: GIIM Note: maturase Location: 796988-797213 bp Feature: domain Description: GIIM Note: maturase Location: 796988-79721 3 bp Feature: gene Location: 797943-799421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798309-798930 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 798309-798930 bp Feature: domain Description: GIIM Note: maturase Location: 798990-799215 bp Feature: domain Description: GIIM Note: maturase Location: 798990-79921 5 bp Feature: gene Location: 799528-800742 bp Feature: domain Description: Transposase_mut Location: 799558-800650 bp Feature: domain Description: Transposase_mut Location: 799558-800650 bp Feature: gene Location: 800974-801849 bp Feature: domain Description: DUF1080 Location: 801109-801811 bp Feature: domain Description: DUF1 080 Location: 801 1 09-801 81 1 bp Feature: gene Location: 2478312-2478461 bp Feature: domain Description: Sigma70_ECF Location: 2478321-2478459 bp Feature: domain Description: Sigma70_ECF Location: 2478321 -2478459 bp Feature: gene Location: 2478800-2479192 bp Feature: gene Location: 2479295-2479675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2479571-2479655 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2479571 -2479655 bp Feature: gene Location: 2479479-2480633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2479656-2480265 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2479656-2480265 bp Feature: domain Description: GIIM Note: maturase Location: 2480340-2480547 bp Feature: domain Description: GIIM Note: maturase Location: 2480340-2480547 bp Feature: gene Location: 2480940-2481596 bp Feature: domain Description: AzoR Location: 2480943-2481570 bp Feature: domain Description: AzoR Location: 2480943-2481 570 bp Feature: gene Location: 2481681-2482352 bp Feature: domain Description: Isochorismatase Location: 2481726-2482245 bp Feature: domain Description: Isochorismatase Location: 2481 726-2482245 bp Feature: gene Location: 3081394-3081603 bp Feature: gene Location: 3081933-3082604 bp Feature: gene Location: 3082653-3084131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3083019-3083640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 308301 9-3083640 bp Feature: domain Description: GIIM Note: maturase Location: 3083700-3083925 bp Feature: domain Description: GIIM Note: maturase Location: 3083700-3083925 bp Feature: gene Location: 3084238-3085452 bp Feature: domain Description: Transposase_mut Location: 3084268-3085360 bp Feature: domain Description: Transposase_mut Location: 3084268-3085360 bp Feature: gene Location: 3085763-3086563 bp Feature: domain Description: GlpF Location: 3085802-3086552 bp Feature: domain Description: GlpF Location: 3085802-3086552 bp Feature: gene Location: 3623589-3624206 bp Feature: gene Location: 3624210-3624647 bp Feature: gene Location: 3624696-3626174 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3625062-3625683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3625062-3625683 bp Feature: domain Description: GIIM Note: maturase Location: 3625743-3625968 bp Feature: domain Description: GIIM Note: maturase Location: 3625743-3625968 bp Feature: gene Location: 3626281-3627495 bp Feature: domain Description: Transposase_mut Location: 3626311-3627403 bp Feature: domain Description: Transposase_mut Location: 362631 1 -3627403 bp Feature: gene Location: 3627609-3627827 bp Feature: gene Location: 3646481-3646663 bp Feature: gene Location: 3646758-3647972 bp Feature: domain Description: Transposase_mut Location: 3646788-3647880 bp Feature: domain Description: Transposase_mut Location: 3646788-3647880 bp Feature: gene Location: 3648079-3649557 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3648445-3649066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3648445-3649066 bp Feature: domain Description: GIIM Note: maturase Location: 3649126-3649351 bp Feature: domain Description: GIIM Note: maturase Location: 36491 26-3649351 bp Feature: gene Location: 3649606-3650046 bp Feature: gene Location: 3650050-3650727 bp Feature: gene Location: 3806719-3807576 bp Feature: gene Location: 3807736-3807969 bp Feature: gene Location: 3808198-3811995 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3808786-3809275 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 3808786-3809275 bp Feature: gene Location: 3811979-3812200 bp Feature: gene Location: 3812784-3813275 bp Feature: gene Location: 3921274-3924714 bp Feature: domain Description: CSLREA_Nterm Location: 3923146-3923218 bp Feature: domain Description: CSLREA_Nterm Location: 39231 46-392321 8 bp Feature: gene Location: 3925174-3925689 bp Feature: domain Description: DDE_Tnp_1_4 Location: 3925192-3925684 bp Feature: domain Description: DDE_Tnp_1 _4 Location: 39251 92-3925684 bp Feature: gene Location: 3925798-3927135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3926074-3926767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3926074-3926767 bp Feature: domain Description: GIIM Note: maturase Location: 3926839-3927049 bp Feature: domain Description: GIIM Note: maturase Location: 3926839-3927049 bp Feature: gene Location: 3927117-3927515 bp Feature: gene Location: 3927559-3927825 bp Feature: gene Location: 6198288-6198740 bp Feature: domain Description: Ion_trans_2 Location: 6198483-6198684 bp Feature: domain Description: Ion_trans_2 Location: 61 98483-61 98684 bp Feature: gene Location: 6198788-6199765 bp Feature: gene Location: 6200034-6201512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6200400-6201021 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6200400-6201 021 bp Feature: domain Description: GIIM Note: maturase Location: 6201081-6201306 bp Feature: domain Description: GIIM Note: maturase Location: 6201 081 -6201 306 bp Feature: gene Location: 6201561-6202028 bp Feature: gene Location: 6202077-6204407 bp Feature: domain Description: STKc_PknB_like Location: 6202536-6203418 bp Feature: domain Description: STKc_PknB_like Location: 6202536-620341 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bioD (TIGR00347), RVT-GII, GIIM (pfam08388), Transposase_mut (pfam00872), DUF1080 (pfam06439), Sigma70_ECF (pfam07638), AzoR (COG1182), Isochorismatase (pfam00857), GlpF (COG0580), RVT-UG1
CSLREA_Nterm (TIGR04214), DDE_Tnp_1_4 (pfam13701), Ion_trans_2 (pfam07885), STKc_PknB_like (cd14014)