myRT

myRT report for GCA_008083745.1_ASM808374v1

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Seq: VSHS01000040.1 Vibrio mimicus strain N2789 NODE_108, whole genome shotgun sequence (25489 bp)
Overview 1 RT 1: 8762-13620 bp Neighborhood of RT #1 [8762, 13631] RVT-UG7 YjgR YjgR Feature: gene Location: 8762-9043 bp Feature: gene Location: 9105-9734 bp Feature: gene Location: 9844-11382 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10216-10636 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 021 6-1 0636 bp Feature: gene Location: 11494-11724 bp Feature: gene Location: 11841-13631 bp Feature: domain Description: YjgR Location: 12168-12558 bp Feature: domain Description: YjgR Location: 1 21 68-1 2558 bp Feature: domain Description: YjgR Location: 13125-13620 bp Feature: domain Description: YjgR Location: 1 31 25-1 3620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, YjgR (COG0433)

Seq: VSHS01000004.1 Vibrio mimicus strain N2789 NODE_6, whole genome shotgun sequence (256854 bp)
Overview 1 RT 1: 99864-103253 bp Neighborhood of RT #1 [99864, 103253] RVT_N RVT-GII RVT-GII GIIM HNHc YegP Feature: gene Location: 99864-100046 bp Feature: gene Location: 100143-100292 bp Feature: gene Location: 100436-101170 bp Feature: domain Description: RVT_N Location: 100508-100751 bp Feature: domain Description: RVT_N Location: 100508-100751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100796-101168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 100796-101168 bp Feature: gene Location: 101186-102109 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101189-101441 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101189-101441 bp Feature: domain Description: GIIM Note: maturase Location: 101492-101726 bp Feature: domain Description: GIIM Note: maturase Location: 101492 -10172 6 bp Feature: domain Description: HNHc Note: nucleases Location: 101942-102104 bp Feature: domain Description: HNHc Note: nucleases Location: 101942 -102 104 bp Feature: gene Location: 102225-102377 bp Feature: domain Description: YegP Location: 102228-102345 bp Feature: domain Description: YegP Location: 102 2 2 8-102 345 bp Feature: gene Location: 102693-103253 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), YegP (COG3422)