myRT

myRT report for GCA_008085455.1_ASM808545v1

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Seq: VSDQ01000163.1 Seonamhaeicola marinus strain B011 scaffold933, whole genome shotgun sequence (379996 bp)
Overview 1 RT 1: 368276-376857 bp Neighborhood of RT #1 [368276, 379685] BaeS Piru_Ver_Nterm HEAT_2 HEAT HEAT_2 HEAT_2 CxxCH_CxxCH_CxxCH_TIGR02603 RVT-Retrons SWIM WGR_DNA_ligase Feature: gene Location: 368276-369619 bp Feature: domain Description: BaeS Location: 368954-369614 bp Feature: domain Description: BaeS Location: 368954-36961 4 bp Feature: gene Location: 369784-373194 bp Feature: domain Description: Piru_Ver_Nterm Location: 370249-371164 bp Feature: domain Description: Piru_Ver_Nterm Location: 370249-371 1 64 bp Feature: domain Description: HEAT_2 Location: 371386-371560 bp Feature: domain Description: HEAT_2 Location: 371 386-371 560 bp Feature: domain Description: HEAT Location: 371575-371647 bp Feature: domain Description: HEAT Location: 371 575-371 647 bp Feature: domain Description: HEAT_2 Location: 371782-371968 bp Feature: domain Description: HEAT_2 Location: 371 782-371 968 bp Feature: domain Description: HEAT_2 Location: 372304-372475 bp Feature: domain Description: HEAT_2 Location: 372304-372475 bp Feature: domain Description: CxxCH_CxxCH_CxxCH_TIGR02603 Location: 372766-373165 bp Feature: domain Description: CxxCH_CxxCH_CxxCH_TIGR02603 Location: 372766-3731 65 bp Feature: gene Location: 373226-374728 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 373772-374393 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 373772-374393 bp Feature: gene Location: 374987-376615 bp Feature: domain Description: SWIM Location: 376499-376589 bp Feature: domain Description: SWIM Location: 376499-376589 bp Feature: gene Location: 376620-379685 bp Feature: domain Description: WGR_DNA_ligase Location: 376638-376857 bp Feature: domain Description: WGR_DNA_ligase Location: 376638-376857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), Piru_Ver_Nterm (TIGR02604), HEAT_2 (pfam13646), HEAT (sd00044), CxxCH_CxxCH_CxxCH_TIGR02603, RVT-Retrons, SWIM (pfam04434), WGR_DNA_ligase (cd07998)