myRT

myRT report for GCA_008107605.1_ASM810760v1

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Seq: RSFG01000003.1 Streptomyces sp. CB01881 Scaffold3, whole genome shotgun sequence (1220631 bp)
Overview 1 RT 1: 124049-128880 bp 2 RT 2: 876525-880843 bp 3 RT 3: 985997-991891 bp Neighborhood of RT #1 [124049, 128927] PRK12282 Peptidase_S66 RVT-GII GIIM PRK09270 Neighborhood of RT #2 [876525, 880843] DUF397 RVT-GII Intron_maturas2 HATPase_RsbW-like Neighborhood of RT #3 [985997, 992241] DUF4277 COG5421 RVT-GII Intron_maturas2 BID_1 Feature: gene Location: 124049-125143 bp Feature: domain Description: PRK12282 Location: 124163-125135 bp Feature: domain Description: PRK1 2282 Location: 1 241 63-1 251 35 bp Feature: gene Location: 125263-126222 bp Feature: domain Description: Peptidase_S66 Location: 125335-126160 bp Feature: domain Description: Peptidase_S66 Location: 1 25335-1 261 60 bp Feature: gene Location: 126762-128129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 127107-127731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 271 07-1 27731 bp Feature: domain Description: GIIM Note: maturase Location: 127824-128031 bp Feature: domain Description: GIIM Note: maturase Location: 1 27824-1 28031 bp Feature: gene Location: 128238-128927 bp Feature: domain Description: PRK09270 Location: 128310-128880 bp Feature: domain Description: PRK09270 Location: 1 2831 0-1 28880 bp Feature: gene Location: 876525-876722 bp Feature: domain Description: DUF397 Location: 876552-876705 bp Feature: domain Description: DUF397 Location: 876552-876705 bp Feature: gene Location: 877833-878027 bp Feature: gene Location: 878365-880173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878626-879442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 878626-879442 bp Feature: domain Description: Intron_maturas2 Location: 879577-879793 bp Feature: domain Description: Intron_maturas2 Location: 879577-879793 bp Feature: gene Location: 880299-880562 bp Feature: domain Description: HATPase_RsbW-like Location: 880317-880521 bp Feature: domain Description: HATPase_RsbW-like Location: 88031 7-880521 bp Feature: gene Location: 880559-880843 bp Feature: gene Location: 985997-986398 bp Feature: gene Location: 986690-988297 bp Feature: domain Description: DUF4277 Location: 986717-986984 bp Feature: domain Description: DUF4277 Location: 98671 7-986984 bp Feature: domain Description: COG5421 Location: 987023-988091 bp Feature: domain Description: COG5421 Location: 987023-988091 bp Feature: gene Location: 989152-990981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 989413-990208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98941 3-990208 bp Feature: domain Description: Intron_maturas2 Location: 990343-990559 bp Feature: domain Description: Intron_maturas2 Location: 990343-990559 bp Feature: gene Location: 991085-991342 bp Feature: gene Location: 991591-992241 bp Feature: domain Description: BID_1 Location: 991714-991891 bp Feature: domain Description: BID_1 Location: 991 71 4-991 891 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12282 (tryptophanyl-tRNA synthetase II; Reviewed), Peptidase_S66 (pfam02016), RVT-GII, GIIM (pfam08388), PRK09270 (nucleoside triphosphate hydrolase domain-containing protein; Reviewed), DUF397 (pfam04149), Intron_maturas2 (pfam01348), HATPase_RsbW-like (cd16936), DUF4277 (pfam14104), COG5421 (Transposase )
BID_1 (smart00634)

Seq: RSFG01000006.1 Streptomyces sp. CB01881 Scaffold6, whole genome shotgun sequence (311848 bp)
Overview 1 RT 1: 36039-39876 bp 2 RT 2: 123941-132109 bp Neighborhood of RT #1 [36039, 39876] Replic_Relax RVT-GII GIIM Neighborhood of RT #2 [123941, 132109] mycofact_glyco RVT-GII Intron_maturas2 HNHc RVT-GII GIIM Feature: gene Location: 36039-36515 bp Feature: domain Description: Replic_Relax Location: 36045-36189 bp Feature: domain Description: Replic_Relax Location: 36045-36189 bp Feature: gene Location: 36821-37153 bp Feature: gene Location: 37132-38601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37474-38170 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37474-38170 bp Feature: domain Description: GIIM Note: maturase Location: 38239-38452 bp Feature: domain Description: GIIM Note: maturase Location: 382 39-38452 bp Feature: gene Location: 39172-39306 bp Feature: gene Location: 39673-39876 bp Feature: gene Location: 123941-124441 bp Feature: gene Location: 124838-126205 bp Feature: domain Description: mycofact_glyco Location: 125102-125942 bp Feature: domain Description: mycofact_glyco Location: 12 5102 -12 5942 bp Feature: gene Location: 126713-128497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126974-127766 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 6974-12 7766 bp Feature: domain Description: Intron_maturas2 Location: 127868-128099 bp Feature: domain Description: Intron_maturas2 Location: 12 7868-12 8099 bp Feature: domain Description: HNHc Note: nucleases Location: 128267-128456 bp Feature: domain Description: HNHc Note: nucleases Location: 12 82 67-12 8456 bp Feature: gene Location: 129077-130342 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 129293-129953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 92 93-12 9953 bp Feature: domain Description: GIIM Note: maturase Location: 130037-130256 bp Feature: domain Description: GIIM Note: maturase Location: 130037-1302 56 bp Feature: gene Location: 131015-131539 bp Feature: gene Location: 131612-132109 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Replic_Relax (pfam13814), RVT-GII, GIIM (pfam08388), mycofact_glyco (TIGR03965), Intron_maturas2 (pfam01348), HNHc (smart00507)