myRT

myRT report for GCA_008120115.1_ASM812011v1

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Seq: QFUC01000011.1 Klebsiella pneumoniae strain P072F scaffold_000011, whole genome shotgun sequence (239052 bp)
Overview 1 RT 1: 31919-38772 bp Neighborhood of RT #1 [31919, 38789] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31919-32584 bp Feature: domain Description: INT_P4_C Location: 32024-32582 bp Feature: domain Description: INT_P4_C Location: 32024-32582 bp Feature: gene Location: 32845-33285 bp Feature: domain Description: Integrase_1 Location: 32851-33067 bp Feature: domain Description: Integrase_1 Location: 32851 -33067 bp Feature: gene Location: 33342-35420 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33750-34194 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33750-341 94 bp Feature: gene Location: 35420-38029 bp Feature: domain Description: FimD Location: 35477-38018 bp Feature: domain Description: FimD Location: 35477-3801 8 bp Feature: gene Location: 38061-38789 bp Feature: domain Description: FimC Location: 38109-38772 bp Feature: domain Description: FimC Location: 381 09-38772 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: QFUC01000018.1 Klebsiella pneumoniae strain P072F scaffold_000018, whole genome shotgun sequence (124983 bp)
Overview 1 RT 1: 94939-97727 bp Neighborhood of RT #1 [94939, 97741] RVT-GII PRK10276 Feature: gene Location: 94939-95517 bp Feature: gene Location: 95524-95658 bp Feature: gene Location: 95661-96914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96066-96780 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96066-96780 bp Feature: gene Location: 96965-97198 bp Feature: gene Location: 97316-97741 bp Feature: domain Description: PRK10276 Location: 97319-97727 bp Feature: domain Description: PRK102 76 Location: 97319-9772 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit)