myRT

myRT report for GCA_008120405.1_ASM812040v1

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Seq: QFVD01000014.1 Enterobacter hormaechei strain P043G PI scaffold_000014, whole genome shotgun sequence (125242 bp)
Overview 1 RT 1: 1492-6366 bp Neighborhood of RT #1 [1492, 6368] PinE RVT-Retrons INT_C_like_1 Atl1 Feature: gene Location: 1492-2067 bp Feature: domain Description: PinE Location: 1501-2053 bp Feature: domain Description: PinE Location: 1 501 -2053 bp Feature: gene Location: 2181-2666 bp Feature: gene Location: 2682-4397 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2820-3447 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2820-3447 bp Feature: gene Location: 4590-5681 bp Feature: domain Description: INT_C_like_1 Location: 5187-5637 bp Feature: domain Description: INT_C_like_1 Location: 51 87-5637 bp Feature: gene Location: 6057-6368 bp Feature: domain Description: Atl1 Location: 6063-6366 bp Feature: domain Description: Atl1 Location: 6063-6366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-Retrons, INT_C_like_1 (cd01184), Atl1 (COG3695)

Seq: QFVD01000028.1 Enterobacter hormaechei strain P043G PI scaffold_000028, whole genome shotgun sequence (66494 bp)
Overview 1 RT 1: 49135-59148 bp Neighborhood of RT #1 [49135, 59180] YeeA YeeA RVT-UG5 YeeA TIGR02687 Feature: gene Location: 49135-51069 bp Feature: domain Description: YeeA Location: 49774-50485 bp Feature: domain Description: YeeA Location: 49774-50485 bp Feature: domain Description: YeeA Location: 50641-50965 bp Feature: domain Description: YeeA Location: 50641-50965 bp Feature: gene Location: 51092-51556 bp Feature: gene Location: 51573-54575 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 52035-52524 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 52 035-52 52 4 bp Feature: gene Location: 54575-56359 bp Feature: domain Description: YeeA Location: 54608-56291 bp Feature: domain Description: YeeA Location: 54608-562 91 bp Feature: gene Location: 56577-59180 bp Feature: domain Description: TIGR02687 Location: 56595-59148 bp Feature: domain Description: TIGR02 687 Location: 56595-59148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YeeA (COG1002), RVT-UG5, TIGR02687 (TIGR02687 family protein)

Seq: QFVD01000064.1 Enterobacter hormaechei strain P043G PI scaffold_000064, whole genome shotgun sequence (21177 bp)
Overview 1 RT 1: 16132-20574 bp Neighborhood of RT #1 [16132, 20576] umuC PRK10276 RVT-GII InsA DDE_Tnp_IS1 Feature: gene Location: 16132-17403 bp Feature: domain Description: umuC Location: 16135-17395 bp Feature: domain Description: umuC Location: 1613 5-173 95 bp Feature: gene Location: 17403-18215 bp Feature: domain Description: PRK10276 Location: 17835-18198 bp Feature: domain Description: PRK10276 Location: 1783 5-18198 bp Feature: gene Location: 18240-19727 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18645-19335 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18645-193 3 5 bp Feature: gene Location: 19879-20154 bp Feature: domain Description: InsA Location: 19882-20146 bp Feature: domain Description: InsA Location: 19882-20146 bp Feature: gene Location: 20199-20576 bp Feature: domain Description: DDE_Tnp_IS1 Location: 20202-20574 bp Feature: domain Description: DDE_Tnp_IS1 Location: 20202-20574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, InsA (COG3677), DDE_Tnp_IS1 (pfam03400)