myRT

myRT report for GCA_008121325.1_ASM812132v1

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Seq: VKLV01000102.1 Bacteroides pyogenes strain KG-32 NODE_102_length_2412_cov_93.406565, whole genome shotgun sequence (2412 bp)
Overview 1 RT 1: 336-1912 bp Neighborhood of RT #1 [336, 2295] RVT_N RVT-GII GIIM Feature: gene Location: 336-528 bp Feature: gene Location: 613-2295 bp Ori: TYK32292.1 Gene: ltrA Feature: domain Description: RVT_N Location: 685-925 bp Feature: domain Description: RVT_N Location: 685-925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973-1627 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 973-1 627 bp Feature: domain Description: GIIM Note: maturase Location: 1681-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1 681 -1 91 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VKLV01000015.1 Bacteroides pyogenes strain KG-32 NODE_15_length_63122_cov_25.966569, whole genome shotgun sequence (63122 bp)
Overview 1 RT 1: 46546-53748 bp Neighborhood of RT #1 [46546, 53783] VirE_N RVT-UG28b Wza PRK11519 PRK11519 PRK11519 Feature: gene Location: 46546-47334 bp Feature: gene Location: 47409-48341 bp Ori: TYK37843.1 Feature: domain Description: VirE_N Location: 47520-47889 bp Feature: domain Description: VirE_N Location: 4752 0-47889 bp Feature: gene Location: 48499-50256 bp Ori: TYK37831.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 48913-49654 bp Feature: RT Description: RVT-UG2 8b Note: UG2 8b RT Location: 48913-49654 bp Feature: gene Location: 50598-51392 bp Ori: TYK37832.1 Feature: domain Description: Wza Location: 50832-51294 bp Feature: domain Description: Wza Location: 50832 -512 94 bp Feature: gene Location: 51408-53783 bp Ori: TYK37833.1 Feature: domain Description: PRK11519 Location: 51420-51774 bp Feature: domain Description: PRK11519 Location: 5142 0-51774 bp Feature: domain Description: PRK11519 Location: 52080-52371 bp Feature: domain Description: PRK11519 Location: 52 080-52 371 bp Feature: domain Description: PRK11519 Location: 52659-53748 bp Feature: domain Description: PRK11519 Location: 52 659-53748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT VirE_N (pfam08800), RVT-UG28b, Wza (COG1596), PRK11519 (tyrosine-protein kinase Wzc)