myRT

myRT report for GCA_008121385.1_ASM812138v1

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Seq: VKLW01000037.1 Bacteroides pyogenes strain KG-31 NODE_37_length_32360_cov_28.477678, whole genome shotgun sequence (32360 bp)
Overview 1 RT 1: 14806-18841 bp Neighborhood of RT #1 [14806, 18841] DUF4133 DUF4134 RVT_N RVT-GII GIIM DUF4134 Feature: gene Location: 14806-15138 bp Feature: domain Description: DUF4133 Location: 14824-15094 bp Feature: domain Description: DUF41 33 Location: 1 4824-1 5094 bp Feature: gene Location: 15172-15414 bp Feature: domain Description: DUF4134 Location: 15319-15409 bp Feature: domain Description: DUF41 34 Location: 1 531 9-1 5409 bp Feature: gene Location: 15411-17066 bp Feature: RT Description: RVT_N Location: 15468-15705 bp Feature: RT Description: RVT_N Location: 1 5468-1 5705 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15756-16404 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5756-1 6404 bp Feature: domain Description: GIIM Note: maturase Location: 16461-16692 bp Feature: domain Description: GIIM Note: maturase Location: 1 6461 -1 6692 bp Feature: gene Location: 17683-17913 bp Feature: domain Description: DUF4134 Location: 17722-17899 bp Feature: domain Description: DUF41 34 Location: 1 7722-1 7899 bp Feature: gene Location: 18125-18841 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4133 (pfam13571), DUF4134 (pfam13572), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VKLW01000004.1 Bacteroides pyogenes strain KG-31 NODE_4_length_157793_cov_22.905110, whole genome shotgun sequence (157793 bp)
Overview 1 RT 1: 96115-100296 bp Neighborhood of RT #1 [96115, 100340] Avd_like Fib_succ_major RVT-DGRs HU_rel Thioredoxin_8 Feature: gene Location: 96115-96480 bp Feature: domain Description: Avd_like Location: 96139-96445 bp Feature: domain Description: Avd_like Location: 96139-96445 bp Feature: gene Location: 96516-97115 bp Feature: domain Description: Fib_succ_major Location: 96798-96963 bp Feature: domain Description: Fib_succ_major Location: 96798-96963 bp Feature: gene Location: 97102-98391 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 97297-98089 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 972 97-98089 bp Feature: gene Location: 98613-99110 bp Feature: domain Description: HU_rel Location: 98616-98961 bp Feature: domain Description: HU_rel Location: 98616-98961 bp Feature: gene Location: 99429-100340 bp Feature: domain Description: Thioredoxin_8 Location: 100029-100296 bp Feature: domain Description: Thioredoxin_8 Location: 10002 9-1002 96 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), Fib_succ_major (TIGR02145), RVT-DGRs, HU_rel (TIGR01201), Thioredoxin_8 (pfam13905)

Seq: VKLW01000008.1 Bacteroides pyogenes strain KG-31 NODE_8_length_110260_cov_22.347752, whole genome shotgun sequence (110260 bp)
Overview 1 RT 1: 54795-58283 bp Neighborhood of RT #1 [54795, 58283] RVT-DGRs Feature: gene Location: 54795-55211 bp Feature: gene Location: 55230-55616 bp Feature: gene Location: 55579-56607 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55783-56455 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 55783 -56455 bp Feature: gene Location: 56771-56917 bp Feature: gene Location: 56967-58283 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs