myRT

myRT report for GCA_008121405.1_ASM812140v1

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Seq: VKLY01000011.1 Bacteroides pyogenes strain KG-29 NODE_11_length_100212_cov_27.302553, whole genome shotgun sequence (100212 bp)
Overview 1 RT 1: 1-4101 bp Neighborhood of RT #1 [1, 4136] Thioredoxin_8 HU_rel RVT-DGRs Fib_succ_major Avd_like Feature: gene Location: 1-822 bp Feature: domain Description: Thioredoxin_8 Location: 601-766 bp Feature: domain Description: Thioredoxin_8 Location: 601 -766 bp Feature: gene Location: 1141-1638 bp Feature: domain Description: HU_rel Location: 1144-1489 bp Feature: domain Description: HU_rel Location: 1 1 44-1 489 bp Feature: gene Location: 1860-3149 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2055-2847 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2055-2847 bp Feature: gene Location: 3136-3735 bp Feature: domain Description: Fib_succ_major Location: 3418-3583 bp Feature: domain Description: Fib_succ_major Location: 341 8-3583 bp Feature: gene Location: 3771-4136 bp Feature: domain Description: Avd_like Location: 3795-4101 bp Feature: domain Description: Avd_like Location: 3795-41 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HU_rel (TIGR01201), Thioredoxin_8 (pfam13905), RVT-DGRs, Fib_succ_major (TIGR02145), Avd_like (cd16376)

Seq: VKLY01000037.1 Bacteroides pyogenes strain KG-29 NODE_37_length_32360_cov_35.222939, whole genome shotgun sequence (32360 bp)
Overview 1 RT 1: 13520-17511 bp Neighborhood of RT #1 [13520, 17555] DUF4134 RVT_N RVT-GII GIIM DUF4134 DUF4133 Feature: gene Location: 13520-14236 bp Feature: gene Location: 14448-14678 bp Feature: domain Description: DUF4134 Location: 14487-14664 bp Feature: domain Description: DUF4134 Location: 14487-14664 bp Feature: gene Location: 15295-16950 bp Feature: RT Description: RVT_N Location: 15352-15589 bp Feature: RT Description: RVT_N Location: 15352 -15589 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15640-16288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15640-162 88 bp Feature: domain Description: GIIM Note: maturase Location: 16345-16576 bp Feature: domain Description: GIIM Note: maturase Location: 16345-16576 bp Feature: gene Location: 16947-17189 bp Feature: domain Description: DUF4134 Location: 17094-17184 bp Feature: domain Description: DUF4134 Location: 17094-17184 bp Feature: gene Location: 17223-17555 bp Feature: domain Description: DUF4133 Location: 17241-17511 bp Feature: domain Description: DUF4133 Location: 172 41-17511 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4134 (pfam13572), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF4133 (pfam13571)

Seq: VKLY01000007.1 Bacteroides pyogenes strain KG-29 NODE_7_length_110260_cov_26.413237, whole genome shotgun sequence (110260 bp)
Overview 1 RT 1: 51978-55466 bp Neighborhood of RT #1 [51978, 55466] RVT-DGRs Feature: gene Location: 51978-53294 bp Feature: gene Location: 53344-53490 bp Feature: gene Location: 53654-54682 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53858-54530 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 53 858-5453 0 bp Feature: gene Location: 54645-55031 bp Feature: gene Location: 55050-55466 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs