myRT

myRT report for GCA_008122485.1_ASM812248v1

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Seq: VSTG01000001.1 [Eubacterium] rectale strain L2-21 NODE_1_length_323910_cov_26.2426, whole genome shotgun sequence (323910 bp)
Overview 1 RT 1: 114160-116620 bp Neighborhood of RT #1 [114160, 116640] Avd_like RVT-DGRs XhlA Phage_r1t_holin Feature: gene Location: 114160-114579 bp Feature: domain Description: Avd_like Location: 114244-114550 bp Feature: domain Description: Avd_like Location: 1 1 4244-1 1 4550 bp Feature: gene Location: 114588-114731 bp Feature: gene Location: 114933-116069 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 115191-115851 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1 1 51 91 -1 1 5851 bp Feature: gene Location: 116127-116390 bp Feature: domain Description: XhlA Location: 116151-116355 bp Feature: domain Description: XhlA Location: 1 1 61 51 -1 1 6355 bp Feature: gene Location: 116410-116640 bp Feature: domain Description: Phage_r1t_holin Location: 116449-116620 bp Feature: domain Description: Phage_r1 t_holin Location: 1 1 6449-1 1 6620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, XhlA (pfam10779), Phage_r1t_holin (pfam16945)

Seq: VSTG01000002.1 [Eubacterium] rectale strain L2-21 NODE_2_length_302123_cov_27.4265, whole genome shotgun sequence (302123 bp)
Overview 1 RT 1: 148606-154447 bp Neighborhood of RT #1 [148606, 154605] DUF2971 RVT-UG8 RVT-UG3 DUF4145 Feature: gene Location: 148606-148791 bp Feature: gene Location: 149004-149945 bp Feature: domain Description: DUF2971 Location: 149463-149748 bp Feature: domain Description: DUF2 971 Location: 149463-149748 bp Feature: gene Location: 149961-152018 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 150501-150942 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 150501-150942 bp Feature: gene Location: 152144-153472 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 152444-152909 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 152 444-152 909 bp Feature: gene Location: 153498-154103 bp Feature: gene Location: 154108-154605 bp Feature: domain Description: DUF4145 Location: 154180-154447 bp Feature: domain Description: DUF4145 Location: 154180-154447 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2971 (pfam11185), RVT-UG8, RVT-UG3, DUF4145 (pfam13643)

Seq: VSTG01000003.1 [Eubacterium] rectale strain L2-21 NODE_3_length_251593_cov_23.6623, whole genome shotgun sequence (251593 bp)
Overview 1 RT 1: 3-2356 bp Neighborhood of RT #1 [3, 2356] RVT-GII GIIM Feature: gene Location: 3-803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-3 51 bp Feature: domain Description: GIIM Note: maturase Location: 408-630 bp Feature: domain Description: GIIM Note: maturase Location: 408-63 0 bp Feature: gene Location: 976-1749 bp Feature: gene Location: 1784-2356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VSTG01000004.1 [Eubacterium] rectale strain L2-21 NODE_4_length_196461_cov_21.9755, whole genome shotgun sequence (196461 bp)
Overview 1 RT 1: 168733-171448 bp Neighborhood of RT #1 [168733, 171448] PemK_toxin RVT-GII GIIM Feature: gene Location: 168733-169119 bp Feature: domain Description: PemK_toxin Location: 168748-169090 bp Feature: domain Description: PemK_toxin Location: 16874 8-169090 bp Feature: gene Location: 169125-169262 bp Feature: gene Location: 169359-170642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169569-170184 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 169569-170184 bp Feature: domain Description: GIIM Note: maturase Location: 170244-170463 bp Feature: domain Description: GIIM Note: maturase Location: 17024 4 -1704 63 bp Feature: gene Location: 170629-170772 bp Feature: gene Location: 171062-171448 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PemK_toxin (pfam02452), RVT-GII, GIIM (pfam08388)

Seq: VSTG01000005.1 [Eubacterium] rectale strain L2-21 NODE_5_length_160433_cov_29.0717, whole genome shotgun sequence (160433 bp)
Overview 1 RT 1: 3-2487 bp Neighborhood of RT #1 [3, 2519] RVT-GII GIIM TIGR03172 matur_yqeB matur_yqeB Feature: gene Location: 3-803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-351 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-35 1 bp Feature: domain Description: GIIM Note: maturase Location: 408-630 bp Feature: domain Description: GIIM Note: maturase Location: 408-630 bp Feature: gene Location: 896-1510 bp Feature: domain Description: TIGR03172 Location: 908-1445 bp Feature: domain Description: TIGR03172 Location: 908-1445 bp Feature: gene Location: 1557-2519 bp Feature: domain Description: matur_yqeB Location: 1608-1803 bp Feature: domain Description: matur_yqeB Location: 1608-1803 bp Feature: domain Description: matur_yqeB Location: 1872-2487 bp Feature: domain Description: matur_yqeB Location: 1872-2487 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), TIGR03172 (probable selenium-dependent hydroxylase accessory protein YqeC), matur_yqeB (TIGR03309)

Seq: VSTG01000069.1 [Eubacterium] rectale strain L2-21 NODE_69_length_1162_cov_176.127, whole genome shotgun sequence (1162 bp)
Overview 1 RT 1: 3-1137 bp Neighborhood of RT #1 [3, 1137] RVT-GII Feature: gene Location: 3-719 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-720 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 321-720 bp Feature: gene Location: 829-1137 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII