myRT

myRT report for GCA_008123515.1_ASM812351v1

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Seq: VSSR01000106.1 Bradyrhizobium cytisi strain CTAW11 CTAW11_S1_R1__contig_107, whole genome shotgun sequence (1092 bp)
Overview 1 RT 1: 1-1026 bp Neighborhood of RT #1 [1, 1026] RVT-GII Feature: gene Location: 1-654 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 409-643 bp Feature: gene Location: 661-987 bp Feature: gene Location: 889-1026 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VSSR01000140.1 Bradyrhizobium cytisi strain CTAW11 CTAW11_S1_R1__contig_141, whole genome shotgun sequence (2003 bp)
Overview 1 RT 1: 174-1909 bp Neighborhood of RT #1 [174, 1920] COG3436 RVT-GII Feature: gene Location: 174-1040 bp Feature: domain Description: COG3436 Location: 537-999 bp Feature: domain Description: COG3436 Location: 537-999 bp Feature: gene Location: 1212-1340 bp Feature: gene Location: 1555-1920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1762-1909 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1762 -1909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, COG3436 (Transposase )

Seq: VSSR01000016.1 Bradyrhizobium cytisi strain CTAW11 CTAW11_S1_R1__contig_16, whole genome shotgun sequence (315604 bp)
Overview 1 RT 1: 67766-73062 bp Neighborhood of RT #1 [67766, 73062] RVT-Retrons Trypsin_2 Feature: gene Location: 67766-67990 bp Feature: gene Location: 68579-68875 bp Feature: gene Location: 69431-71038 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69596-70193 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69596-70193 bp Feature: domain Description: Trypsin_2 Location: 70547-70961 bp Feature: domain Description: Trypsin_2 Location: 70547-70961 bp Feature: gene Location: 71293-72099 bp Feature: gene Location: 72154-73062 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, Trypsin_2 (pfam13365)

Seq: VSSR01000169.1 Bradyrhizobium cytisi strain CTAW11 CTAW11_S1_R1__contig_170, whole genome shotgun sequence (3428 bp)
Overview 1 RT 1: 2023-3414 bp Neighborhood of RT #1 [2023, 3425] RVT-GII Feature: gene Location: 2023-2259 bp Feature: gene Location: 2328-2762 bp Feature: gene Location: 2928-3425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183-3414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183-34 14 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VSSR01000177.1 Bradyrhizobium cytisi strain CTAW11 CTAW11_S1_R1__contig_178, whole genome shotgun sequence (1226 bp)
Overview 1 RT 1: 45-1223 bp Neighborhood of RT #1 [45, 1223] RVT-GII Feature: gene Location: 45-941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48-480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 48-480 bp Feature: gene Location: 966-1223 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: VSSR01000084.1 Bradyrhizobium cytisi strain CTAW11 CTAW11_S1_R1__contig_85, whole genome shotgun sequence (16844 bp)
Overview 1 RT 1: 117-1728 bp Neighborhood of RT #1 [117, 1781] RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 117-842 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126-450 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 126 -450 bp Feature: domain Description: GIIM Note: maturase Location: 537-747 bp Feature: domain Description: GIIM Note: maturase Location: 537-747 bp Feature: gene Location: 895-1614 bp Feature: domain Description: DDE_Tnp_IS66 Location: 928-1555 bp Feature: domain Description: DDE_Tnp_IS6 6 Location: 928-1555 bp Feature: gene Location: 1608-1781 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1617-1728 bp Feature: domain Description: DDE_Tnp_IS6 6 _C Location: 16 17-1728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), DDE_Tnp_IS66 (pfam03050)

Seq: VSSR01000093.1 Bradyrhizobium cytisi strain CTAW11 CTAW11_S1_R1__contig_94, whole genome shotgun sequence (11402 bp)
Overview 1 RT 1: 9460-11347 bp Neighborhood of RT #1 [9460, 11347] RVT-GII GIIM Feature: gene Location: 9460-9777 bp Feature: gene Location: 9792-9998 bp Feature: gene Location: 10053-10856 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10056-10461 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10056-10461 bp Feature: domain Description: GIIM Note: maturase Location: 10542-10767 bp Feature: domain Description: GIIM Note: maturase Location: 10542-107 67 bp Feature: gene Location: 10823-11347 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)