myRT

myRT report for GCA_008124795.1_ASM812479v1

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Seq: VNHT01000071.1 Nitrosomonas communis strain Nm2 Ga0105862_1071, whole genome shotgun sequence (16890 bp)
Overview 1 RT 1: 14774-16853 bp Neighborhood of RT #1 [14774, 16888] PHA02517 RVT-GII GIIM DDE_Tnp_ISAZ013 Feature: gene Location: 14774-14989 bp Feature: gene Location: 15046-15795 bp Feature: domain Description: PHA02517 Location: 15313-15784 bp Feature: domain Description: PHA0251 7 Location: 1 531 3-1 5784 bp Feature: gene Location: 15717-16334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15726-15957 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 5726-1 5957 bp Feature: domain Description: GIIM Note: maturase Location: 16029-16251 bp Feature: domain Description: GIIM Note: maturase Location: 1 6029-1 6251 bp Feature: gene Location: 16433-16888 bp Feature: domain Description: DDE_Tnp_ISAZ013 Location: 16436-16853 bp Feature: domain Description: DDE_Tnp_ISAZ01 3 Location: 1 6436-1 6853 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), DDE_Tnp_ISAZ013 (pfam07592)

Seq: VNHT01000115.1 Nitrosomonas communis strain Nm2 Ga0105862_1115, whole genome shotgun sequence (4775 bp)
Overview 1 RT 1: 1569-4774 bp Neighborhood of RT #1 [1569, 4774] PHA02517 group_II_RT_mat RVT-GII RVT-GII GIIM RVT-GII Feature: gene Location: 1569-1745 bp Feature: domain Description: PHA02517 Location: 1572-1743 bp Feature: domain Description: PHA02 517 Location: 1572 -1743 bp Feature: gene Location: 2203-2505 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2290-2446 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 2 2 90-2 446 bp Feature: gene Location: 2480-2770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2483-2729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 483-2 72 9 bp Feature: gene Location: 2885-3499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2903-3116 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 903-3116 bp Feature: domain Description: GIIM Note: maturase Location: 3197-3422 bp Feature: domain Description: GIIM Note: maturase Location: 3197-342 2 bp Feature: gene Location: 3536-3670 bp Feature: gene Location: 4032-4580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4335-4563 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4335-4563 bp Feature: gene Location: 4610-4774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: VNHT01000145.1 Nitrosomonas communis strain Nm2 Ga0105862_1145, whole genome shotgun sequence (2016 bp)
Overview 1 RT 1: 2-1896 bp Neighborhood of RT #1 [2, 1896] RVT-GII DDE_Tnp_IS66 Feature: gene Location: 2-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-3 59 bp Feature: gene Location: 607-1662 bp Feature: domain Description: DDE_Tnp_IS66 Location: 622-1378 bp Feature: domain Description: DDE_Tnp_IS66 Location: 622-13 78 bp Feature: gene Location: 1666-1896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DDE_Tnp_IS66 (pfam03050)

Seq: VNHT01000150.1 Nitrosomonas communis strain Nm2 Ga0105862_1150, whole genome shotgun sequence (1753 bp)
Overview 1 RT 1: 149-1704 bp Neighborhood of RT #1 [149, 1751] RVT-GII RVT-GII GIIM Feature: gene Location: 149-340 bp Feature: gene Location: 509-1009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1004 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 761-1004 bp Feature: gene Location: 1041-1751 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1083-1419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1083-14 19 bp Feature: domain Description: GIIM Note: maturase Location: 1500-1704 bp Feature: domain Description: GIIM Note: maturase Location: 1500-1704 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: VNHT01000167.1 Nitrosomonas communis strain Nm2 Ga0105862_1167, whole genome shotgun sequence (1375 bp)
Overview 1 RT 1: 616-1375 bp Neighborhood of RT #1 [616, 1374] RVT-GII Feature: gene Location: 616-1374 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976-1375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 976-1375 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII