myRT

myRT report for GCA_008125075.1_ASM812507v1

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Seq: VLTH01000003.1 UNVERIFIED_CONTAM: Hungateiclostridium alkalicellulosi strain DSM 17461 CloalDRAFT_CAG.3, whole genome shotgun sequence (918970 bp) Associated domains: TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), 7TMR-DISM_7TM (pfam07695), MA (smart00283)

Seq: VLTH01000002.1 UNVERIFIED_CONTAM: Hungateiclostridium alkalicellulosi strain DSM 17461 CloalDRAFT_CAG.2, whole genome shotgun sequence (3276567 bp) Associated domains: DUF4352 (pfam11611), RVT-GII, GIIM (pfam08388), Dockerin_1 (pfam00404), RHS_repeat (pfam05593), Dockerin_I (cd14256), Methyltransf_31 (pfam13847), TIR-like (pfam10137), Mrr_cat (pfam04471), RVT_N (pfam13655)
NlpD (COG0739), DUF3885 (pfam13021), PhdYeFM_antitox (pfam02604), ParE_toxin (pfam05016), DUF2281 (pfam10047), Doc (COG3654), group_II_RT_mat (TIGR04416), YD_repeat_2x (TIGR01643), Rhs_assc_core (TIGR03696), DUF2691 (pfam10903)
Cas6_III (cd09760), COG4951 (Uncharacterized protein ), RVT-CRISPR, Cas2_I_II_III (cl11442), Cas_Cas1 (pfam01867), PRK06811 (RNA polymerase factor sigma-70; Validated), Cas1_I-II-III (cl00656), PRK09183 (transposase/IS protein; Provisional), PRK06526 (transposase; Provisional), RVT-UG12
SMC_prok_A (TIGR02169), DUF3732 (pfam12532)

Seq: VLTH01000001.1 UNVERIFIED_CONTAM: Hungateiclostridium alkalicellulosi strain DSM 17461 CloalDRAFT_CAG.1, whole genome shotgun sequence (1111689 bp) Associated domains: RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), RHS_repeat (pfam05593), DUF1664 (pfam07889), COG4584 (Transposase ), Asp_protease_2 (pfam13650), DDE_Tnp_1 (pfam01609), RimL (COG1670), RVT_N (pfam13655), GIIM (pfam08388)
COG2006 (Uncharacterized conserved protein, DUF362 family )