myRT

myRT report for GCA_008131375.1_ASM813137v1

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Seq: MJFE01000011.1 Enterococcus faecium strain ERV177 contig_108, whole genome shotgun sequence (9028 bp)
Overview 1 RT 1: 4-5334 bp Neighborhood of RT #1 [4, 5405] AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 4-822 bp Feature: domain Description: AAA_10 Location: 10-808 bp Feature: domain Description: AAA_1 0 Location: 1 0-808 bp Feature: gene Location: 956-2740 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1214-1913 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 4-1 91 3 bp Feature: gene Location: 3479-5029 bp Feature: domain Description: AAA_10 Location: 4808-4991 bp Feature: domain Description: AAA_1 0 Location: 4808-4991 bp Feature: gene Location: 5016-5405 bp Feature: domain Description: TcpE Location: 5034-5334 bp Feature: domain Description: TcpE Location: 5034-5334 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)

Seq: MJFE01000035.1 Enterococcus faecium strain ERV177 contig_13, whole genome shotgun sequence (45576 bp)
Overview 1 RT 1: 38112-43652 bp Neighborhood of RT #1 [38112, 43678] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 38112-38456 bp Feature: domain Description: RelB_DinJ Location: 38322-38448 bp Feature: domain Description: RelB_DinJ Location: 3832 2 -38448 bp Feature: gene Location: 38525-39541 bp Feature: domain Description: FtsK_SpoIIIE Location: 39182-39422 bp Feature: domain Description: FtsK_SpoIIIE Location: 39182 -3942 2 bp Feature: gene Location: 40135-42009 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40501-41197 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40501-41197 bp Feature: domain Description: HNHc Note: nucleases Location: 41737-41896 bp Feature: domain Description: HNHc Note: nucleases Location: 41737-41896 bp Feature: gene Location: 42111-42491 bp Feature: domain Description: FtsK Location: 42126-42366 bp Feature: domain Description: FtsK Location: 42 12 6-42 366 bp Feature: gene Location: 42536-43678 bp Feature: domain Description: Dcm Location: 42539-43652 bp Feature: domain Description: Dcm Location: 42 539-43652 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: MJFE01000041.1 Enterococcus faecium strain ERV177 contig_135, whole genome shotgun sequence (3259 bp)
Overview 1 RT 1: 1-2594 bp Neighborhood of RT #1 [1, 3256] HsdM RVT-AbiP2 Feature: gene Location: 1-1464 bp Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 22-1447 bp Feature: gene Location: 1802-3256 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2129-2594 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2129-2594 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: MJFE01000285.1 Enterococcus faecium strain ERV177 contig_90, whole genome shotgun sequence (10909 bp)
Overview 1 RT 1: 721-3559 bp Neighborhood of RT #1 [721, 3573] RVT-GII HNHc ArdA Feature: gene Location: 721-2631 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054-1792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1054 -1792 bp Feature: domain Description: HNHc Note: nucleases Location: 2347-2512 bp Feature: domain Description: HNHc Note: nucleases Location: 234 7-2512 bp Feature: gene Location: 2792-2959 bp Feature: gene Location: 3076-3573 bp Feature: domain Description: ArdA Location: 3094-3559 bp Feature: domain Description: ArdA Location: 3094 -3559 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507), ArdA (pfam07275)