myRT

myRT report for GCA_008131455.1_ASM813145v1

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Seq: MJFK01000035.1 Enterococcus faecium strain ERV220 contig_13, whole genome shotgun sequence (21863 bp)
Overview 1 RT 1: 5411-14514 bp Neighborhood of RT #1 [5411, 14528] FtsK RVT-GII HNHc HTH_XRE Rol_Rep_N Rep_trans RVT-GII HNHc ArdA Feature: gene Location: 5411-6556 bp Feature: domain Description: FtsK Location: 6020-6536 bp Feature: domain Description: FtsK Location: 6020-6536 bp Feature: gene Location: 6922-7152 bp Feature: gene Location: 7271-9130 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7580-8321 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7580-8321 bp Feature: domain Description: HNHc Note: nucleases Location: 8876-9014 bp Feature: domain Description: HNHc Note: nucleases Location: 8876-901 4 bp Feature: gene Location: 9224-9508 bp Feature: gene Location: 9687-10892 bp Feature: domain Description: HTH_XRE Location: 9732-9876 bp Feature: domain Description: HTH_XRE Location: 9732-9876 bp Feature: domain Description: Rol_Rep_N Location: 9903-10170 bp Feature: domain Description: Rol_Rep_N Location: 9903-1 01 70 bp Feature: domain Description: Rep_trans Location: 10194-10803 bp Feature: domain Description: Rep_trans Location: 1 01 94-1 0803 bp Feature: gene Location: 11676-13586 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12009-12747 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2009-1 2747 bp Feature: domain Description: HNHc Note: nucleases Location: 13302-13467 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3302-1 3467 bp Feature: gene Location: 13747-13914 bp Feature: gene Location: 14031-14528 bp Feature: domain Description: ArdA Location: 14049-14514 bp Feature: domain Description: ArdA Location: 1 4049-1 451 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FtsK (COG1674), RVT-GII, HNHc (smart00507), HTH_XRE (smart00530), Rol_Rep_N (pfam18106), Rep_trans (pfam02486), ArdA (pfam07275)

Seq: MJFK01000138.1 Enterococcus faecium strain ERV220 contig_222, whole genome shotgun sequence (3472 bp)
Overview 1 RT 1: 1-2808 bp Neighborhood of RT #1 [1, 3470] Rve HsdM RVT-AbiP2 Feature: gene Location: 1-177 bp Feature: domain Description: Rve Location: 4-148 bp Feature: domain Description: Rve Location: 4-148 bp Feature: gene Location: 200-1678 bp Feature: domain Description: HsdM Location: 221-1646 bp Feature: domain Description: HsdM Location: 2 2 1-1646 bp Feature: gene Location: 2016-3470 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2343-2808 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 343-2 808 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Rve (COG3316), HsdM (COG0286), RVT-AbiP2

Seq: MJFK01000403.1 Enterococcus faecium strain ERV220 contig_80, whole genome shotgun sequence (22564 bp)
Overview 1 RT 1: 10807-16347 bp Neighborhood of RT #1 [10807, 16373] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 10807-11151 bp Feature: domain Description: RelB_DinJ Location: 11017-11143 bp Feature: domain Description: RelB_DinJ Location: 11017-11143 bp Feature: gene Location: 11220-12236 bp Feature: domain Description: FtsK_SpoIIIE Location: 11877-12117 bp Feature: domain Description: FtsK_SpoIIIE Location: 11877-12117 bp Feature: gene Location: 12830-14704 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13196-13892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 196-13 892 bp Feature: domain Description: HNHc Note: nucleases Location: 14432-14591 bp Feature: domain Description: HNHc Note: nucleases Location: 1443 2-14591 bp Feature: gene Location: 14806-15186 bp Feature: domain Description: FtsK Location: 14821-15061 bp Feature: domain Description: FtsK Location: 14821-15061 bp Feature: gene Location: 15231-16373 bp Feature: domain Description: Dcm Location: 15234-16347 bp Feature: domain Description: Dcm Location: 1523 4-163 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)

Seq: MJFK01000404.1 Enterococcus faecium strain ERV220 contig_81, whole genome shotgun sequence (19828 bp)
Overview 1 RT 1: 14425-19812 bp Neighborhood of RT #1 [14425, 19826] TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 14425-14814 bp Feature: domain Description: TcpE Location: 14443-14743 bp Feature: domain Description: TcpE Location: 14 4 4 3-14 74 3 bp Feature: gene Location: 14801-16351 bp Feature: domain Description: AAA_10 Location: 16130-16313 bp Feature: domain Description: AAA_10 Location: 16130-16313 bp Feature: gene Location: 17048-18874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17348-18047 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1734 8-1804 7 bp Feature: gene Location: 19008-19826 bp Feature: domain Description: AAA_10 Location: 19014-19812 bp Feature: domain Description: AAA_10 Location: 19014 -19812 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII