myRT

myRT report for GCA_008131515.1_ASM813151v1

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Seq: MJFM01000074.1 Enterococcus faecium strain ERV231 contig_165, whole genome shotgun sequence (8474 bp)
Overview 1 RT 1: 5192-8471 bp Neighborhood of RT #1 [5192, 8471] RVT-GII GIIM Feature: gene Location: 5192-5563 bp Feature: gene Location: 5567-5794 bp Feature: gene Location: 5897-7171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6098-6713 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6098-671 3 bp Feature: domain Description: GIIM Note: maturase Location: 6773-6983 bp Feature: domain Description: GIIM Note: maturase Location: 6773-6983 bp Feature: gene Location: 7739-8191 bp Feature: gene Location: 8193-8471 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: MJFM01000106.1 Enterococcus faecium strain ERV231 contig_194, whole genome shotgun sequence (3259 bp)
Overview 1 RT 1: 1-3242 bp Neighborhood of RT #1 [1, 3256] RVT-AbiP2 HsdM Feature: gene Location: 1-1458 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 331-796 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 331-796 bp Feature: gene Location: 1796-3256 bp Feature: domain Description: HsdM Location: 1817-3242 bp Feature: domain Description: HsdM Location: 1817-32 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: MJFM01000223.1 Enterococcus faecium strain ERV231 contig_3, whole genome shotgun sequence (26780 bp)
Overview 1 RT 1: 5689-10721 bp Neighborhood of RT #1 [5689, 10721] PRK03103 PolY_Pol_V_umuC RVT-GII DUF2325 Feature: gene Location: 5689-5838 bp Feature: domain Description: PRK03103 Location: 5695-5806 bp Feature: domain Description: PRK03 103 Location: 5695-5806 bp Feature: gene Location: 6018-6944 bp Feature: domain Description: PolY_Pol_V_umuC Location: 6024-6921 bp Feature: domain Description: PolY_Pol_V_umuC Location: 6024-6921 bp Feature: gene Location: 7065-8927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7374-8112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 74-8112 bp Feature: gene Location: 9852-10157 bp Feature: domain Description: DUF2325 Location: 9945-10095 bp Feature: domain Description: DUF23 25 Location: 9945-10095 bp Feature: gene Location: 10434-10721 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK03103 (DNA polymerase IV; Reviewed), PolY_Pol_V_umuC (cd01700), RVT-GII, DUF2325 (pfam10087)

Seq: MJFM01000290.1 Enterococcus faecium strain ERV231 contig_36, whole genome shotgun sequence (47221 bp)
Overview 1 RT 1: 34979-40524 bp Neighborhood of RT #1 [34979, 40550] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK dcm Feature: gene Location: 34979-35323 bp Feature: domain Description: RelB_DinJ Location: 35189-35315 bp Feature: domain Description: RelB_DinJ Location: 35189-35315 bp Feature: gene Location: 35392-36408 bp Feature: domain Description: FtsK_SpoIIIE Location: 36049-36289 bp Feature: domain Description: FtsK_SpoIIIE Location: 3604 9-36289 bp Feature: gene Location: 37002-38876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37368-38064 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37368-38064 bp Feature: domain Description: HNHc Note: nucleases Location: 38604-38763 bp Feature: domain Description: HNHc Note: nucleases Location: 38604 -38763 bp Feature: gene Location: 38978-39358 bp Feature: domain Description: FtsK Location: 38993-39230 bp Feature: domain Description: FtsK Location: 38993-39230 bp Feature: gene Location: 39396-40550 bp Feature: domain Description: dcm Location: 39483-40524 bp Feature: domain Description: dcm Location: 394 83-4 0524 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), dcm (TIGR00675)