myRT

myRT report for GCA_008131595.1_ASM813159v1

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Seq: MJFQ01000078.1 Enterococcus faecium strain ERV263 contig_169, whole genome shotgun sequence (2689 bp)
Overview 1 RT 1: 117-1164 bp Neighborhood of RT #1 [117, 1979] RVT-GII Feature: gene Location: 117-1979 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 426-1 1 64 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: MJFQ01000110.1 Enterococcus faecium strain ERV263 contig_198, whole genome shotgun sequence (3259 bp)
Overview 1 RT 1: 1-3242 bp Neighborhood of RT #1 [1, 3256] RVT-AbiP2 HsdM Feature: gene Location: 1-1458 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 331-796 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 331-796 bp Feature: gene Location: 1796-3256 bp Feature: domain Description: HsdM Location: 1817-3242 bp Feature: domain Description: HsdM Location: 1817-32 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-AbiP2, HsdM (COG0286)

Seq: MJFQ01000299.1 Enterococcus faecium strain ERV263 contig_72, whole genome shotgun sequence (27430 bp)
Overview 1 RT 1: 4659-10204 bp Neighborhood of RT #1 [4659, 10230] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK dcm Feature: gene Location: 4659-5003 bp Feature: domain Description: RelB_DinJ Location: 4869-4995 bp Feature: domain Description: RelB_DinJ Location: 4869-4995 bp Feature: gene Location: 5072-6088 bp Feature: domain Description: FtsK_SpoIIIE Location: 5729-5969 bp Feature: domain Description: FtsK_SpoIIIE Location: 5729-5969 bp Feature: gene Location: 6682-8556 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7048-7744 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7048-7744 bp Feature: domain Description: HNHc Note: nucleases Location: 8284-8443 bp Feature: domain Description: HNHc Note: nucleases Location: 8284-8443 bp Feature: gene Location: 8658-9038 bp Feature: domain Description: FtsK Location: 8673-8910 bp Feature: domain Description: FtsK Location: 8673 -8910 bp Feature: gene Location: 9031-10230 bp Feature: domain Description: dcm Location: 9163-10204 bp Feature: domain Description: dcm Location: 9163 -10204 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), dcm (TIGR00675)

Seq: MJFQ01000313.1 Enterococcus faecium strain ERV263 contig_85, whole genome shotgun sequence (22313 bp)
Overview 1 RT 1: 19031-22310 bp Neighborhood of RT #1 [19031, 22310] RVT-GII GIIM Feature: gene Location: 19031-19402 bp Feature: gene Location: 19406-19633 bp Feature: gene Location: 19736-21010 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19937-20552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 19937-20552 bp Feature: domain Description: GIIM Note: maturase Location: 20612-20822 bp Feature: domain Description: GIIM Note: maturase Location: 20612-20822 bp Feature: gene Location: 21578-22030 bp Feature: gene Location: 22032-22310 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)