myRT

myRT report for GCA_008131625.1_ASM813162v1

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Seq: MJFS01000013.1 Enterococcus faecium strain ERV275 contig_11, whole genome shotgun sequence (22492 bp)
Overview 1 RT 1: 1899-7462 bp Neighborhood of RT #1 [1899, 7470] dcm FtsK RVT-GII HNHc FtsK_SpoIIIE RelB_DinJ Feature: gene Location: 1899-3098 bp Feature: domain Description: dcm Location: 2031-3072 bp Feature: domain Description: dcm Location: 2031 -3072 bp Feature: gene Location: 3091-3471 bp Feature: domain Description: FtsK Location: 3106-3343 bp Feature: domain Description: FtsK Location: 31 06-3343 bp Feature: gene Location: 3573-5447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3939-4635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3939-4635 bp Feature: domain Description: HNHc Note: nucleases Location: 5175-5334 bp Feature: domain Description: HNHc Note: nucleases Location: 51 75-5334 bp Feature: gene Location: 6041-7057 bp Feature: domain Description: FtsK_SpoIIIE Location: 6698-6938 bp Feature: domain Description: FtsK_SpoIIIE Location: 6698-6938 bp Feature: gene Location: 7126-7470 bp Feature: domain Description: RelB_DinJ Location: 7336-7462 bp Feature: domain Description: RelB_DinJ Location: 7336-7462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dcm (TIGR00675), FtsK (COG1674), RVT-GII, HNHc (smart00507), FtsK_SpoIIIE (pfam01580), RelB_DinJ (TIGR02384)

Seq: MJFS01000164.1 Enterococcus faecium strain ERV275 contig_246, whole genome shotgun sequence (2938 bp)
Overview 1 RT 1: 1-2273 bp Neighborhood of RT #1 [1, 2935] HsdM RVT-AbiP2 Feature: gene Location: 1-1143 bp Feature: domain Description: HsdM Location: 22-1132 bp Feature: domain Description: HsdM Location: 2 2 -1132 bp Feature: gene Location: 1481-2935 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1808-2273 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1808-2 2 73 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: MJFS01000203.1 Enterococcus faecium strain ERV275 contig_31, whole genome shotgun sequence (91240 bp)
Overview 1 RT 1: 47282-53638 bp Neighborhood of RT #1 [47282, 53646] bac_cardiolipin RVT-GII ptsS_2 PstC Feature: gene Location: 47282-48730 bp Feature: domain Description: bac_cardiolipin Location: 47297-48728 bp Feature: domain Description: bac_cardiolipin Location: 47297-48728 bp Feature: gene Location: 48902-49036 bp Feature: gene Location: 49048-50910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49357-50095 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493 57-50095 bp Feature: gene Location: 51754-52611 bp Feature: domain Description: ptsS_2 Location: 51757-52561 bp Feature: domain Description: ptsS_2 Location: 51757-52561 bp Feature: gene Location: 52696-53646 bp Feature: domain Description: PstC Location: 52750-53638 bp Feature: domain Description: PstC Location: 52750-53 63 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT bac_cardiolipin (TIGR04265), RVT-GII, ptsS_2 (TIGR02136), PstC (COG0573)

Seq: MJFS01000216.1 Enterococcus faecium strain ERV275 contig_43, whole genome shotgun sequence (17440 bp)
Overview 1 RT 1: 3547-11184 bp Neighborhood of RT #1 [3547, 11184] TcpE AAA_10 RVT-GII AAA_10 Feature: gene Location: 3547-3936 bp Feature: domain Description: TcpE Location: 3565-3865 bp Feature: domain Description: TcpE Location: 3565-3865 bp Feature: gene Location: 3923-5473 bp Feature: domain Description: AAA_10 Location: 5252-5435 bp Feature: domain Description: AAA_10 Location: 5252-54 35 bp Feature: gene Location: 6170-7996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6470-7169 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64 70-7169 bp Feature: gene Location: 8130-9050 bp Feature: domain Description: AAA_10 Location: 8136-9015 bp Feature: domain Description: AAA_10 Location: 8136-9015 bp Feature: gene Location: 9055-11184 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TcpE (pfam12648), AAA_10 (pfam12846), RVT-GII

Seq: MJFS01000245.1 Enterococcus faecium strain ERV275 contig_7, whole genome shotgun sequence (2838 bp)
Overview 1 RT 1: 208-1999 bp Neighborhood of RT #1 [208, 2118] RVT-GII HNHc Feature: gene Location: 208-2118 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 541-1279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 41-1279 bp Feature: domain Description: HNHc Note: nucleases Location: 1834-1999 bp Feature: domain Description: HNHc Note: nucleases Location: 1834-1999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)