myRT

myRT report for GCA_008131755.1_ASM813175v1

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Seq: MJFY01000150.1 Enterococcus faecium strain ERV98 contig_233, whole genome shotgun sequence (6956 bp)
Overview 1 RT 1: 5-5335 bp Neighborhood of RT #1 [5, 5406] AAA_10 RVT-GII AAA_10 TcpE Feature: gene Location: 5-823 bp Feature: domain Description: AAA_10 Location: 11-809 bp Feature: domain Description: AAA_1 0 Location: 1 1 -809 bp Feature: gene Location: 957-2741 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1215-1914 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 5-1 91 4 bp Feature: gene Location: 3480-5030 bp Feature: domain Description: AAA_10 Location: 4809-4992 bp Feature: domain Description: AAA_1 0 Location: 4809-4992 bp Feature: gene Location: 5017-5406 bp Feature: domain Description: TcpE Location: 5035-5335 bp Feature: domain Description: TcpE Location: 5035-5335 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, TcpE (pfam12648)

Seq: MJFY01000490.1 Enterococcus faecium strain ERV98 contig_61, whole genome shotgun sequence (3256 bp)
Overview 1 RT 1: 1-2591 bp Neighborhood of RT #1 [1, 3253] HsdM RVT-AbiP2 Feature: gene Location: 1-1461 bp Feature: domain Description: HsdM Location: 22-1447 bp Feature: domain Description: HsdM Location: 2 2 -1447 bp Feature: gene Location: 1799-3253 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2126-2591 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 2 12 6-2 591 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RVT-AbiP2

Seq: MJFY01000513.1 Enterococcus faecium strain ERV98 contig_82, whole genome shotgun sequence (20616 bp)
Overview 1 RT 1: 10648-16188 bp Neighborhood of RT #1 [10648, 16214] RelB_DinJ FtsK_SpoIIIE RVT-GII HNHc FtsK Dcm Feature: gene Location: 10648-10992 bp Feature: domain Description: RelB_DinJ Location: 10858-10984 bp Feature: domain Description: RelB_DinJ Location: 10858-10984 bp Feature: gene Location: 11061-12077 bp Feature: domain Description: FtsK_SpoIIIE Location: 11718-11958 bp Feature: domain Description: FtsK_SpoIIIE Location: 11718-11958 bp Feature: gene Location: 12671-14545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13037-13733 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13 03 7-13 73 3 bp Feature: domain Description: HNHc Note: nucleases Location: 14273-14432 bp Feature: domain Description: HNHc Note: nucleases Location: 14273 -1443 2 bp Feature: gene Location: 14647-15027 bp Feature: domain Description: FtsK Location: 14662-14902 bp Feature: domain Description: FtsK Location: 14662-14902 bp Feature: gene Location: 15072-16214 bp Feature: domain Description: Dcm Location: 15075-16188 bp Feature: domain Description: Dcm Location: 15075-16188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RelB_DinJ (TIGR02384), FtsK_SpoIIIE (pfam01580), RVT-GII, HNHc (smart00507), FtsK (COG1674), Dcm (COG0270)