myRT

myRT report for GCA_008180145.1_ASM818014v1

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Seq: VTBA01000014.1 Acinetobacter baumannii strain 527/16 NODE_14_length_95595_cov_43.1032_ID_27, whole genome shotgun sequence (95595 bp)
Overview 1 RT 1: 67409-73155 bp Neighborhood of RT #1 [67409, 73181] COG3950 COG3950 RVT-Retrons CirA COG5515 Feature: gene Location: 67409-68233 bp Feature: domain Description: COG3950 Location: 67574-68012 bp Feature: domain Description: COG3950 Location: 67574-6801 2 bp Feature: gene Location: 68335-68952 bp Feature: domain Description: COG3950 Location: 68509-68947 bp Feature: domain Description: COG3950 Location: 68509-68947 bp Feature: gene Location: 68953-69900 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69064-69664 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 69064-69664 bp Feature: gene Location: 70551-72761 bp Feature: domain Description: CirA Location: 70662-72759 bp Feature: domain Description: CirA Location: 70662-72759 bp Feature: gene Location: 72969-73181 bp Feature: domain Description: COG5515 Location: 72972-73155 bp Feature: domain Description: COG551 5 Location: 72972-731 55 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons, CirA (COG1629), COG5515 (Uncharacterized protein )

Seq: VTBA01000004.1 Acinetobacter baumannii strain 527/16 NODE_4_length_202104_cov_28.5163_ID_7, whole genome shotgun sequence (202104 bp)
Overview 1 RT 1: 153170-158731 bp Neighborhood of RT #1 [153170, 158787] TetR_N RVT-Retrons PaaD PaaY Feature: gene Location: 153170-153772 bp Feature: domain Description: TetR_N Location: 153218-153341 bp Feature: domain Description: TetR_N Location: 1532 18-153341 bp Feature: gene Location: 155172-155972 bp Feature: gene Location: 156189-157325 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156444-157098 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 156444-157098 bp Feature: gene Location: 157721-158104 bp Feature: domain Description: PaaD Location: 157763-158096 bp Feature: domain Description: PaaD Location: 157763-158096 bp Feature: gene Location: 158182-158787 bp Feature: domain Description: PaaY Location: 158191-158731 bp Feature: domain Description: PaaY Location: 158191-158731 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TetR_N (pfam00440), RVT-Retrons, PaaD (TIGR02286), PaaY (TIGR02287)