myRT

myRT report for GCA_008180415.1_ASM818041v1

Download annotations/find similar RTs

Seq: VTEI01000003.1 Bacillus vietnamensis strain CH34_1T scaffold3.1, whole genome shotgun sequence (770558 bp)
Overview 1 RT 1: 7615-13486 bp 2 RT 2: 191423-201911 bp Neighborhood of RT #1 [7615, 13486] xerC Acetyltransf_1 RVT-GII HNHc Neighborhood of RT #2 [191423, 201952] AhpC RacX RVT-GII Peptidases_S8_S53 CW_binding_2 CW_binding_2 CW_binding_2 Peptidases_S8_Thermitase_like CW_binding_2 CW_binding_2 CW_binding_2 Feature: gene Location: 7615-8457 bp Feature: domain Description: xerC Location: 7657-8443 bp Feature: domain Description: xerC Location: 7657-8443 bp Feature: gene Location: 8621-9133 bp Ori: TYS17504.1 Feature: domain Description: Acetyltransf_1 Location: 8750-9041 bp Feature: domain Description: Acetyltransf_1 Location: 8750-9041 bp Feature: gene Location: 9347-11116 bp Ori: TYS18103.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9605-10304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9605-1 0304 bp Feature: domain Description: HNHc Note: nucleases Location: 10892-10997 bp Feature: domain Description: HNHc Note: nucleases Location: 1 0892-1 0997 bp Feature: gene Location: 11876-12241 bp Feature: gene Location: 12797-13486 bp Feature: gene Location: 191423-191815 bp Ori: TYS17659.1 Feature: domain Description: AhpC Location: 191429-191798 bp Feature: domain Description: AhpC Location: 1 91 429-1 91 798 bp Feature: gene Location: 191873-192565 bp Ori: TYS17660.1 Feature: domain Description: RacX Location: 191876-192563 bp Feature: domain Description: RacX Location: 1 91 876-1 92563 bp Feature: gene Location: 193545-194751 bp Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 193740-194340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 93740-1 94340 bp Feature: gene Location: 195347-199597 bp Ori: TYS17661.1 Feature: domain Description: Peptidases_S8_S53 Location: 195872-197156 bp Feature: domain Description: Peptidases_S8_S53 Location: 1 95872-1 971 56 bp Feature: domain Description: CW_binding_2 Location: 198662-198941 bp Feature: domain Description: CW_binding_2 Location: 1 98662-1 98941 bp Feature: domain Description: CW_binding_2 Location: 198989-199256 bp Feature: domain Description: CW_binding_2 Location: 1 98989-1 99256 bp Feature: domain Description: CW_binding_2 Location: 199295-199565 bp Feature: domain Description: CW_binding_2 Location: 1 99295-1 99565 bp Feature: gene Location: 199901-201952 bp Ori: TYS17662.1 Feature: domain Description: Peptidases_S8_Thermitase_like Location: 200183-200960 bp Feature: domain Description: Peptidases_S8_Thermitase_like Location: 2001 83-200960 bp Feature: domain Description: CW_binding_2 Location: 201038-201338 bp Feature: domain Description: CW_binding_2 Location: 201 038-201 338 bp Feature: domain Description: CW_binding_2 Location: 201377-201638 bp Feature: domain Description: CW_binding_2 Location: 201 377-201 638 bp Feature: domain Description: CW_binding_2 Location: 201662-201911 bp Feature: domain Description: CW_binding_2 Location: 201 662-201 91 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT xerC (PRK01287), Acetyltransf_1 (pfam00583), RVT-GII, HNHc (smart00507), AhpC (TIGR03137), RacX (COG1794), Peptidases_S8_S53 (cl10459), CW_binding_2 (pfam04122), Peptidases_S8_Thermitase_like (cd07484)

Seq: VTEI01000019.1 Bacillus vietnamensis strain CH34_1T scaffold19.1, whole genome shotgun sequence (55219 bp)
Overview 1 RT 1: 1912-7199 bp Neighborhood of RT #1 [1912, 7228] pepcterm_ATPase DUF5348 RVT-GII HNHc Acetyltransf_1 Nudix_Hydrolase_18 Feature: gene Location: 1912-2712 bp Ori: TYS13499.1 Feature: domain Description: pepcterm_ATPase Location: 1915-2698 bp Feature: domain Description: pepcterm_ATPase Location: 1915-2 698 bp Feature: gene Location: 2709-2948 bp Ori: TYS13500.1 Feature: domain Description: DUF5348 Location: 2733-2943 bp Feature: domain Description: DUF5348 Location: 2 733-2 943 bp Feature: gene Location: 3813-5582 bp Ori: TYS13547.1 Gene: ltrA Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4071-4770 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4071-4770 bp Feature: domain Description: HNHc Note: nucleases Location: 5358-5463 bp Feature: domain Description: HNHc Note: nucleases Location: 5358-5463 bp Feature: gene Location: 5821-6231 bp Ori: TYS13501.1 Feature: domain Description: Acetyltransf_1 Location: 5899-6148 bp Feature: domain Description: Acetyltransf_1 Location: 5899-6148 bp Feature: gene Location: 6779-7228 bp Feature: domain Description: Nudix_Hydrolase_18 Location: 6815-7199 bp Feature: domain Description: Nudix_Hydrolase_18 Location: 6815-7199 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pepcterm_ATPase (TIGR03015), DUF5348 (pfam17295), RVT-GII, HNHc (smart00507), Acetyltransf_1 (pfam00583), Nudix_Hydrolase_18 (cd04677)

Seq: VTEI01000004.1 Bacillus vietnamensis strain CH34_1T scaffold4.1, whole genome shotgun sequence (280973 bp)
Overview 1 RT 1: 215945-228207 bp Neighborhood of RT #1 [215945, 228236] MazG-like AE_Prim_S_like RVT-UG10 SIR2-like PLDc_N_DEXD_b1 SSL2 DUF3427 Feature: gene Location: 215945-216673 bp Feature: gene Location: 216868-216981 bp Feature: domain Description: MazG-like Location: 216871-216976 bp Feature: domain Description: MazG-like Location: 216871-216976 bp Feature: gene Location: 217205-222856 bp Ori: TYS17109.1 Feature: domain Description: AE_Prim_S_like Location: 217424-217802 bp Feature: domain Description: AE_Prim_S_like Location: 217424-217802 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 218639-219290 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 21863 9-219290 bp Feature: gene Location: 223305-224855 bp Ori: TYS17110.1 Feature: domain Description: SIR2-like Location: 223965-224685 bp Feature: domain Description: SIR2-like Location: 223 965-224685 bp Feature: gene Location: 225087-228236 bp Ori: TYS17111.1 Feature: domain Description: PLDc_N_DEXD_b1 Location: 225513-225936 bp Feature: domain Description: PLDc_N_DEXD_b1 Location: 225513 -22593 6 bp Feature: domain Description: SSL2 Location: 226017-227118 bp Feature: domain Description: SSL2 Location: 226017-227118 bp Feature: domain Description: DUF3427 Location: 227619-228207 bp Feature: domain Description: DUF3 427 Location: 227619-228207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MazG-like (pfam12643), AE_Prim_S_like (cl01287), RVT-UG10, SIR2-like (cd01406), PLDc_N_DEXD_b1 (cd09203), SSL2 (COG1061), DUF3427 (pfam11907)