myRT

myRT report for GCA_008244635.1_ASM824463v1

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Seq: VTFP01000006.1 Pseudomonas aeruginosa strain CCUG 73745 contig_6, whole genome shotgun sequence (345198 bp)
Overview 1 RT 1: 71434-81844 bp Neighborhood of RT #1 [71434, 81844] PRK05658 PBP2_BvgS_HisK_like PRK09776 PAS PRK10060 RVT_N RVT-GII GIIM HNH Feature: gene Location: 71434-73287 bp Feature: domain Description: PRK05658 Location: 71446-73285 bp Feature: domain Description: PRK05658 Location: 71 446-73285 bp Feature: gene Location: 73394-77131 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73502-74159 bp Feature: domain Description: PBP2_BvgS_HisK_like Location: 73502-741 59 bp Feature: domain Description: PRK09776 Location: 74372-74843 bp Feature: domain Description: PRK09776 Location: 74372-74843 bp Feature: domain Description: PAS Location: 74903-75425 bp Feature: domain Description: PAS Location: 74903-75425 bp Feature: domain Description: PRK10060 Location: 75434-77081 bp Feature: domain Description: PRK1 0060 Location: 75434-77081 bp Feature: gene Location: 78212-79897 bp Feature: RT Description: RVT_N Location: 78269-78509 bp Feature: RT Description: RVT_N Location: 78269-78509 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78557-79193 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78557-791 93 bp Feature: domain Description: GIIM Note: maturase Location: 79247-79478 bp Feature: domain Description: GIIM Note: maturase Location: 79247-79478 bp Feature: domain Description: HNH Note: nucleases Location: 79730-79868 bp Feature: domain Description: HNH Note: nucleases Location: 79730-79868 bp Feature: gene Location: 80435-81112 bp Feature: gene Location: 81623-81844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PBP2_BvgS_HisK_like (cd01007), PRK09776 (putative diguanylate cyclase; Provisional), PAS (smart00091), PRK10060 (cyclic di-GMP phosphodiesterase), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)