myRT

myRT report for GCA_008269335.1_ASM826933v1

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Seq: VTLL01000010.1 Vibrio cholerae strain 2439 contig00010, whole genome shotgun sequence (142204 bp)
Overview 1 RT 1: 86912-89284 bp Neighborhood of RT #1 [86912, 89284] PHA01082 RVT-Retrons HTH_XRE Feature: gene Location: 86912-87244 bp Feature: gene Location: 87379-87735 bp Feature: domain Description: PHA01082 Location: 87382-87727 bp Feature: domain Description: PHA01 082 Location: 87382-87727 bp Feature: gene Location: 87847-88797 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88033-88567 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88033-88567 bp Feature: gene Location: 88775-89086 bp Feature: domain Description: HTH_XRE Location: 88787-88946 bp Feature: domain Description: HTH_XRE Location: 88787-88946 bp Feature: gene Location: 89141-89284 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA01082 (putative transcription regulator), RVT-Retrons, HTH_XRE (smart00530)

Seq: VTLL01000013.1 Vibrio cholerae strain 2439 contig00013, whole genome shotgun sequence (123742 bp)
Overview 1 RT 1: 120532-122968 bp Neighborhood of RT #1 [120532, 123498] SLATT_5 RVT-UG17 Feature: gene Location: 120532-121014 bp Feature: gene Location: 121598-122164 bp Feature: domain Description: SLATT_5 Location: 121607-122138 bp Feature: domain Description: SLATT_5 Location: 12 1607-12 2 138 bp Feature: gene Location: 122164-123498 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 122386-122968 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 12 2 386-12 2 968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17