myRT

myRT report for GCA_008304165.1_ASM830416v1

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Seq: RYCV01000003.1 Escherichia coli strain R1176 contig_0, whole genome shotgun sequence (5117644 bp)
Overview 1 RT 1: 3703723-3707617 bp 2 RT 2: 4530241-4534123 bp Neighborhood of RT #1 [3703723, 3707617] LacI PBP1_GntR RVT-GII GIIM RVT-GII Neighborhood of RT #2 [4530241, 4534128] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 3703723-3704754 bp Feature: domain Description: LacI Location: 3703765-3703900 bp Feature: domain Description: LacI Location: 3703765-3703900 bp Feature: domain Description: PBP1_GntR Location: 3703939-3704749 bp Feature: domain Description: PBP1 _GntR Location: 3703939-3704749 bp Feature: gene Location: 3704788-3704973 bp Feature: gene Location: 3705281-3706132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3705284-3705692 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3705284-3705692 bp Feature: domain Description: GIIM Note: maturase Location: 3705740-3705962 bp Feature: domain Description: GIIM Note: maturase Location: 3705740-3705962 bp Feature: gene Location: 3706105-3706539 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3706297-3706513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3706297-370651 3 bp Feature: gene Location: 3706708-3706905 bp Feature: gene Location: 3707264-3707617 bp Feature: gene Location: 4530241-4530957 bp Feature: domain Description: rph Location: 4530244-4530952 bp Feature: domain Description: rph Location: 4530244-4530952 bp Feature: gene Location: 4531008-4531664 bp Feature: domain Description: pyrE Location: 4531026-4531659 bp Feature: domain Description: pyrE Location: 4531 026-4531 659 bp Feature: gene Location: 4531962-4532921 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4532097-4532646 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 4532097-4532646 bp Feature: gene Location: 4532967-4533563 bp Feature: domain Description: slmA Location: 4532973-4533549 bp Feature: domain Description: slmA Location: 4532973-4533549 bp Feature: gene Location: 4533670-4534128 bp Feature: domain Description: dut Location: 4533676-4534123 bp Feature: domain Description: dut Location: 4533676-45341 23 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LacI (pfam00356), PBP1_GntR (cd01575), RVT-GII, GIIM (pfam08388), rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)