myRT

myRT report for GCA_008326305.1_ASM832630v1

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Seq: BIXY01000001.1 Dictyobacter sp. Uno17 DNA, sequence001, whole genome shotgun sequence (320345 bp)
Overview 1 RT 1: 102193-105525 bp Neighborhood of RT #1 [102193, 105525] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 102193-102387 bp Feature: gene Location: 102399-103052 bp Feature: gene Location: 103254-105050 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 103515-104310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0351 5-1 0431 0 bp Feature: domain Description: Intron_maturas2 Location: 104436-104685 bp Feature: domain Description: Intron_maturas2 Location: 1 04436-1 04685 bp Feature: domain Description: HNHc Note: nucleases Location: 104850-105015 bp Feature: domain Description: HNHc Note: nucleases Location: 1 04850-1 0501 5 bp Feature: gene Location: 105075-105224 bp Feature: gene Location: 105364-105525 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BIXY01000070.1 Dictyobacter sp. Uno17 DNA, sequence070, whole genome shotgun sequence (38289 bp)
Overview 1 RT 1: 20246-25744 bp Neighborhood of RT #1 [20246, 25842] nucleoid_noc nucleoid_noc BcsQ RVT-GII Intron_maturas2 HNHc CxxC_CXXC_SSSS Feature: gene Location: 20246-21292 bp Feature: domain Description: nucleoid_noc Location: 20381-20510 bp Feature: domain Description: nucleoid_noc Location: 2 0381-2 0510 bp Feature: domain Description: nucleoid_noc Location: 20636-21089 bp Feature: domain Description: nucleoid_noc Location: 2 0636-2 1089 bp Feature: gene Location: 21285-22058 bp Feature: domain Description: BcsQ Location: 21336-22053 bp Feature: domain Description: BcsQ Location: 2 1336-2 2 053 bp Feature: gene Location: 22055-23980 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22325-23114 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 32 5-2 3114 bp Feature: domain Description: Intron_maturas2 Location: 23243-23486 bp Feature: domain Description: Intron_maturas2 Location: 2 32 43-2 3486 bp Feature: domain Description: HNHc Note: nucleases Location: 23660-23861 bp Feature: domain Description: HNHc Note: nucleases Location: 2 3660-2 3861 bp Feature: gene Location: 25040-25582 bp Feature: gene Location: 25618-25842 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 25621-25744 bp Feature: domain Description: CxxC_CXXC_SSSS Location: 2 562 1-2 5744 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT nucleoid_noc (TIGR04285), BcsQ (COG1192), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CxxC_CXXC_SSSS (smart00834)

Seq: BIXY01000134.1 Dictyobacter sp. Uno17 DNA, sequence134, whole genome shotgun sequence (10019 bp)
Overview 1 RT 1: 6457-10018 bp Neighborhood of RT #1 [6457, 10018] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 6457-6648 bp Feature: gene Location: 6681-7028 bp Feature: gene Location: 7267-9177 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7534-8368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 753 4-83 68 bp Feature: domain Description: Intron_maturas2 Location: 8482-8740 bp Feature: domain Description: Intron_maturas2 Location: 8482-8740 bp Feature: domain Description: HNHc Note: nucleases Location: 8917-9064 bp Feature: domain Description: HNHc Note: nucleases Location: 8917-9064 bp Feature: gene Location: 9623-10018 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BIXY01000154.1 Dictyobacter sp. Uno17 DNA, sequence154, whole genome shotgun sequence (6880 bp)
Overview 1 RT 1: 2-1612 bp Neighborhood of RT #1 [2, 1758] RVT-GII Cupin_2 Feature: gene Location: 2-310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29-206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29-206 bp Feature: gene Location: 300-461 bp Feature: gene Location: 1285-1758 bp Feature: domain Description: Cupin_2 Location: 1426-1612 bp Feature: domain Description: Cupin_2 Location: 14 26-1612 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Cupin_2 (pfam07883)

Seq: BIXY01000166.1 Dictyobacter sp. Uno17 DNA, sequence166, whole genome shotgun sequence (5425 bp)
Overview 1 RT 1: 2-1819 bp Neighborhood of RT #1 [2, 1819] RVT-GII Feature: gene Location: 2-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269-1076 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 269-1076 bp Feature: gene Location: 1298-1432 bp Feature: gene Location: 1649-1819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: BIXY01000181.1 Dictyobacter sp. Uno17 DNA, sequence181, whole genome shotgun sequence (3973 bp)
Overview 1 RT 1: 1-3971 bp Neighborhood of RT #1 [1, 3971] RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RHS_repeat RVT-GII Intron_maturas2 HNHc Feature: gene Location: 1-1137 bp Feature: domain Description: RHS_repeat Location: 295-406 bp Feature: domain Description: RHS_repeat Location: 295-406 bp Feature: domain Description: RHS_repeat Location: 484-562 bp Feature: domain Description: RHS_repeat Location: 484-56 2 bp Feature: domain Description: RHS_repeat Location: 604-691 bp Feature: domain Description: RHS_repeat Location: 6 04-6 91 bp Feature: domain Description: RHS_repeat Location: 748-817 bp Feature: domain Description: RHS_repeat Location: 748-817 bp Feature: domain Description: RHS_repeat Location: 871-958 bp Feature: domain Description: RHS_repeat Location: 871-958 bp Feature: domain Description: RHS_repeat Location: 964-1027 bp Feature: domain Description: RHS_repeat Location: 96 4-1027 bp Feature: gene Location: 1238-2998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1499-2294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1499-2294 bp Feature: domain Description: Intron_maturas2 Location: 2411-2621 bp Feature: domain Description: Intron_maturas2 Location: 2411-26 21 bp Feature: domain Description: HNHc Note: nucleases Location: 2798-2981 bp Feature: domain Description: HNHc Note: nucleases Location: 2798-2981 bp Feature: gene Location: 3281-3514 bp Feature: gene Location: 3534-3971 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RHS_repeat (pfam05593), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BIXY01000191.1 Dictyobacter sp. Uno17 DNA, sequence191, whole genome shotgun sequence (2986 bp)
Overview 1 RT 1: 2-2968 bp Neighborhood of RT #1 [2, 2968] RRXRR RVT-GII GIIM HNH Feature: gene Location: 2-187 bp Feature: domain Description: RRXRR Location: 5-185 bp Feature: domain Description: RRXRR Location: 5-185 bp Feature: gene Location: 887-1855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-1790 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1163-17 90 bp Feature: gene Location: 1927-2520 bp Feature: domain Description: GIIM Note: maturase Location: 1939-2074 bp Feature: domain Description: GIIM Note: maturase Location: 1939-207 4 bp Feature: domain Description: HNH Note: nucleases Location: 2365-2491 bp Feature: domain Description: HNH Note: nucleases Location: 2365-2491 bp Feature: gene Location: 2606-2968 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RRXRR (pfam14239), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: BIXY01000203.1 Dictyobacter sp. Uno17 DNA, sequence203, whole genome shotgun sequence (2414 bp)
Overview 1 RT 1: 600-2292 bp Neighborhood of RT #1 [600, 2324] RVT_N RVT-GII GIIM HNH Feature: gene Location: 600-2324 bp Feature: domain Description: RVT_N Location: 645-888 bp Feature: domain Description: RVT_N Location: 645-8 8 8 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 945-1614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 945-1614 bp Feature: domain Description: GIIM Note: maturase Location: 1704-1938 bp Feature: domain Description: GIIM Note: maturase Location: 1704-1938 bp Feature: domain Description: HNH Note: nucleases Location: 2157-2292 bp Feature: domain Description: HNH Note: nucleases Location: 2157-2292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: BIXY01000204.1 Dictyobacter sp. Uno17 DNA, sequence204, whole genome shotgun sequence (2393 bp)
Overview 1 RT 1: 75-2392 bp Neighborhood of RT #1 [75, 2392] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 75-1895 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-1131 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 336-1131 bp Feature: domain Description: Intron_maturas2 Location: 1236-1473 bp Feature: domain Description: Intron_maturas2 Location: 1236-1473 bp Feature: domain Description: HNHc Note: nucleases Location: 1635-1821 bp Feature: domain Description: HNHc Note: nucleases Location: 1635-1821 bp Feature: gene Location: 1922-2125 bp Feature: gene Location: 2189-2392 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: BIXY01000216.1 Dictyobacter sp. Uno17 DNA, sequence216, whole genome shotgun sequence (1915 bp)
Overview 1 RT 1: 9-1698 bp Neighborhood of RT #1 [9, 1811] RVT_N RVT-GII YkfC HNH Feature: gene Location: 9-1811 bp Feature: domain Description: RVT_N Location: 75-318 bp Feature: domain Description: RVT_N Location: 75-318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 375-10 23 bp Feature: domain Description: YkfC Location: 1182-1368 bp Feature: domain Description: YkfC Location: 1182-1368 bp Feature: domain Description: HNH Note: nucleases Location: 1566-1698 bp Feature: domain Description: HNH Note: nucleases Location: 1566-1698 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, YkfC (COG3344), HNH (pfam01844)