myRT

myRT report for GCA_008326485.1_ASM832648v1

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Seq: BKCC01000005.1 Escherichia coli PWD451 DNA, contig_5, whole genome shotgun sequence (18016 bp)
Overview 1 RT 1: 9679-13561 bp Neighborhood of RT #1 [9679, 13566] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 9679-10137 bp Feature: domain Description: dut Location: 9685-10132 bp Feature: domain Description: dut Location: 9685-1 01 32 bp Feature: gene Location: 10244-10840 bp Feature: domain Description: slmA Location: 10250-10826 bp Feature: domain Description: slmA Location: 1 0250-1 0826 bp Feature: gene Location: 10886-11845 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11021-11570 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 1 021 -1 1 570 bp Feature: gene Location: 12143-12799 bp Feature: domain Description: pyrE Location: 12161-12794 bp Feature: domain Description: pyrE Location: 1 21 61 -1 2794 bp Feature: gene Location: 12850-13566 bp Feature: domain Description: rph Location: 12853-13561 bp Feature: domain Description: rph Location: 1 2853-1 3561 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), dut (TIGR00576)

Seq: BKCC01000248.1 Escherichia coli PWD451 DNA, contig_248, whole genome shotgun sequence (1831 bp)
Overview 1 RT 1: 448-1708 bp Neighborhood of RT #1 [448, 1764] RVT-GII GIIM HNHc Feature: gene Location: 448-1764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-1042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 451-1042 bp Feature: domain Description: GIIM Note: maturase Location: 1093-1327 bp Feature: domain Description: GIIM Note: maturase Location: 1093-132 7 bp Feature: domain Description: HNHc Note: nucleases Location: 1558-1708 bp Feature: domain Description: HNHc Note: nucleases Location: 1558-1708 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)