myRT

myRT report for GCA_008326685.1_ASM832668v1

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Seq: BJWS01000203.1 Escherichia albertii ZAC44-3 DNA, entry203, whole genome shotgun sequence (79226 bp)
Overview 1 RT 1: 23872-25567 bp Neighborhood of RT #1 [23872, 25567] group_II_RT_mat RVT-GII GIIM Feature: gene Location: 23872-24093 bp Feature: gene Location: 24134-24448 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 24176-24383 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 241 76-24383 bp Feature: gene Location: 24557-24691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24566-24677 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24566-24677 bp Feature: gene Location: 24883-25275 bp Feature: domain Description: GIIM Note: maturase Location: 24994-25183 bp Feature: domain Description: GIIM Note: maturase Location: 24994-251 83 bp Feature: gene Location: 25400-25567 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT-GII, GIIM (pfam08388)

Seq: BJWS01000265.1 Escherichia albertii ZAC44-3 DNA, entry265, whole genome shotgun sequence (20675 bp)
Overview 1 RT 1: 13364-16483 bp Neighborhood of RT #1 [13364, 16485] PRK10954 RVT-UG4 PRK09413 Feature: gene Location: 13364-13855 bp Feature: domain Description: PRK10954 Location: 13430-13805 bp Feature: domain Description: PRK10954 Location: 13430-13805 bp Feature: gene Location: 14019-14171 bp Feature: gene Location: 14245-15342 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 14602-15046 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 14602 -15046 bp Feature: gene Location: 15266-16108 bp Feature: gene Location: 16117-16485 bp Feature: domain Description: PRK09413 Location: 16132-16483 bp Feature: domain Description: PRK09413 Location: 16132 -16483 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10954 (thiol:disulfide interchange protein DsbA), RVT-UG4, PRK09413 (IS2 repressor TnpA; Reviewed)

Seq: BJWS01000267.1 Escherichia albertii ZAC44-3 DNA, entry267, whole genome shotgun sequence (133019 bp)
Overview 1 RT 1: 53163-58349 bp Neighborhood of RT #1 [53163, 58349] groEL RVT_N RVT-GII GIIM HNHc DUF4156 Feature: gene Location: 53163-54809 bp Feature: domain Description: groEL Location: 53169-54792 bp Feature: domain Description: groEL Location: 53 169-54792 bp Feature: gene Location: 55192-55476 bp Feature: gene Location: 55906-57573 bp Feature: domain Description: RVT_N Location: 55969-56203 bp Feature: domain Description: RVT_N Location: 55969-56203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56257-56902 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56257-56902 bp Feature: domain Description: GIIM Note: maturase Location: 56956-57187 bp Feature: domain Description: GIIM Note: maturase Location: 56956-57187 bp Feature: domain Description: HNHc Note: nucleases Location: 57397-57559 bp Feature: domain Description: HNHc Note: nucleases Location: 573 97-57559 bp Feature: gene Location: 57832-58185 bp Feature: domain Description: DUF4156 Location: 57901-58177 bp Feature: domain Description: DUF4156 Location: 57901-58177 bp Feature: gene Location: 58203-58349 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT groEL (PRK12852), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF4156 (pfam13698)