myRT

myRT report for GCA_008329455.1_ASM832945v1

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Seq: VEWO01000040.1 Bacteroides thetaiotaomicron strain DC20 NODE_42_length_6099_cov_1091.390734, whole genome shotgun sequence (6099 bp)
Overview 1 RT 1: 3076-5182 bp Neighborhood of RT #1 [3076, 5721] RVT-DGRs Feature: gene Location: 3076-4131 bp Feature: gene Location: 4144-4353 bp Feature: gene Location: 4378-5721 bp Ori: KAA0082879.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4585-5182 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4585-51 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VEWO01000008.1 Bacteroides thetaiotaomicron strain DC20 NODE_8_length_335019_cov_451.099683, whole genome shotgun sequence (335019 bp)
Overview 1 RT 1: 28247-38612 bp 2 RT 2: 141091-143819 bp Neighborhood of RT #1 [28247, 38612] DUF1566 Avd_like DUF1566 RVT-DGRs Neighborhood of RT #2 [141091, 143819] RVT-DGRs Feature: gene Location: 28247-34276 bp Ori: KAA0092848.1 Feature: domain Description: DUF1566 Location: 33962-34265 bp Feature: domain Description: DUF1566 Location: 33962 -342 65 bp Feature: gene Location: 34406-34807 bp Ori: KAA0092849.1 Feature: domain Description: Avd_like Location: 34445-34784 bp Feature: domain Description: Avd_like Location: 34445-34784 bp Feature: gene Location: 34820-36241 bp Ori: KAA0092850.1 Feature: domain Description: DUF1566 Location: 34892-35036 bp Feature: domain Description: DUF1566 Location: 34892 -35036 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 35225-35966 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 352 2 5-35966 bp Feature: gene Location: 36232-36585 bp Feature: gene Location: 37905-38612 bp Feature: gene Location: 141091-141333 bp Feature: gene Location: 141513-141998 bp Feature: gene Location: 141995-143299 bp Ori: KAA0092944.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 142208-142802 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 142 2 08-142 802 bp Feature: gene Location: 143394-143628 bp Feature: gene Location: 143625-143819 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: VEWO01000002.1 Bacteroides thetaiotaomicron strain DC20 NODE_2_length_517988_cov_487.156521, whole genome shotgun sequence (517988 bp)
Overview 1 RT 1: 387989-399394 bp Neighborhood of RT #1 [387989, 399510] RVT-Retrons DUF4011 DEXXQc_SF1 DEXXQc_SF1 TIGR00376 MTES_1575 DUF3320 rpsA Feature: gene Location: 387989-388225 bp Feature: gene Location: 388185-390344 bp Feature: gene Location: 390550-391683 bp Ori: KAA0096501.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 390874-391420 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 90874-3 91420 bp Feature: gene Location: 391720-397542 bp Ori: KAA0096502.1 Feature: domain Description: DUF4011 Location: 392875-393388 bp Feature: domain Description: DUF4011 Location: 3 92875-3 93 3 88 bp Feature: domain Description: DEXXQc_SF1 Location: 393727-394270 bp Feature: domain Description: DEXXQc_SF1 Location: 3 93 727-3 94270 bp Feature: domain Description: DEXXQc_SF1 Location: 395161-395914 bp Feature: domain Description: DEXXQc_SF1 Location: 3 95161-3 95914 bp Feature: domain Description: TIGR00376 Location: 396043-396436 bp Feature: domain Description: TIGR003 76 Location: 3 96043 -3 9643 6 bp Feature: domain Description: MTES_1575 Location: 396586-396874 bp Feature: domain Description: MTES_1575 Location: 3 96586-3 96874 bp Feature: domain Description: DUF3320 Location: 397048-397192 bp Feature: domain Description: DUF3 3 20 Location: 3 97048-3 97192 bp Feature: gene Location: 397711-399510 bp Ori: KAA0096503.1 Feature: domain Description: rpsA Location: 397780-399394 bp Feature: domain Description: rpsA Location: 3 97780-3 993 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, DUF4011 (pfam13195), DEXXQc_SF1 (cd18043), TIGR00376 (DNA helicase, putative), MTES_1575 (pfam18741), DUF3320 (pfam11784), rpsA (TIGR00717)

Seq: VEWO01000003.1 Bacteroides thetaiotaomicron strain DC20 NODE_3_length_498239_cov_542.745260, whole genome shotgun sequence (498239 bp)
Overview 1 RT 1: 419091-423028 bp Neighborhood of RT #1 [419091, 423028] RVT-DGRs Feature: gene Location: 419091-419369 bp Feature: gene Location: 419379-420740 bp Feature: gene Location: 421073-422260 bp Ori: KAA0095797.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 421406-422033 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 4 214 06-4 22033 bp Feature: gene Location: 422223-422651 bp Feature: gene Location: 422648-423028 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: VEWO01000024.1 Bacteroides thetaiotaomicron strain DC20 NODE_24_length_89895_cov_450.138090, whole genome shotgun sequence (89895 bp)
Overview 1 RT 1: 73934-78620 bp Neighborhood of RT #1 [73934, 78620] RVT-UG27 HTH_Hin_like Feature: gene Location: 73934-74923 bp Feature: gene Location: 74958-75416 bp Feature: gene Location: 76440-77708 bp Ori: KAA0087302.1 Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 76629-77265 bp Feature: RT Description: RVT-UG27 Note: UG27 RT Location: 76629-77265 bp Feature: gene Location: 77705-78028 bp Ori: KAA0087303.1 Feature: domain Description: HTH_Hin_like Location: 77756-77858 bp Feature: domain Description: HTH_Hin_like Location: 7775 6-7785 8 bp Feature: gene Location: 78018-78620 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG27, HTH_Hin_like (cd00569)