myRT

myRT report for GCA_008363285.1_ASM836328v1

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Seq: RHKT01000252.1 Chloroflexi bacterium isolate CFX N2_1.scaffold_3485, whole genome shotgun sequence (5059 bp)
Overview 1 RT 1: 2405-5056 bp Neighborhood of RT #1 [2405, 5056] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 2405-2593 bp Feature: gene Location: 2700-2879 bp Feature: gene Location: 2918-4735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3179-3974 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 79-3974 bp Feature: domain Description: Intron_maturas2 Location: 4106-4355 bp Feature: domain Description: Intron_maturas2 Location: 41 06-4355 bp Feature: domain Description: HNHc Note: nucleases Location: 4499-4691 bp Feature: domain Description: HNHc Note: nucleases Location: 4499-4691 bp Feature: gene Location: 4862-5056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: RHKT01000423.1 Chloroflexi bacterium isolate CFX N2_1.scaffold_6381, whole genome shotgun sequence (3304 bp)
Overview 1 RT 1: 2-3301 bp Neighborhood of RT #1 [2, 3301] PRK00024 RVT-GII GIIM HNHc PRK00024 Feature: gene Location: 2-547 bp Feature: domain Description: PRK00024 Location: 95-536 bp Feature: domain Description: PRK0002 4 Location: 95-536 bp Feature: gene Location: 1106-2821 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388-2069 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1388-2 069 bp Feature: domain Description: GIIM Note: maturase Location: 2138-2348 bp Feature: domain Description: GIIM Note: maturase Location: 2 138-2 348 bp Feature: domain Description: HNHc Note: nucleases Location: 2654-2786 bp Feature: domain Description: HNHc Note: nucleases Location: 2 654-2 786 bp Feature: gene Location: 2838-3077 bp Feature: domain Description: PRK00024 Location: 2934-3066 bp Feature: domain Description: PRK0002 4 Location: 2 934-3066 bp Feature: gene Location: 3086-3301 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK00024 (DNA repair protein RadC)

Seq: RHKT01000434.1 Chloroflexi bacterium isolate CFX N2_1.scaffold_6703, whole genome shotgun sequence (3202 bp)
Overview 1 RT 1: 1-3201 bp Neighborhood of RT #1 [1, 3201] RVT_N RVT-GII GIIM HNH Feature: gene Location: 1-210 bp Feature: gene Location: 265-2097 bp Feature: RT Description: RVT_N Location: 442-685 bp Feature: RT Description: RVT_N Location: 442-685 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 730-1372 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73 0-13 72 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1657 bp Feature: domain Description: GIIM Note: maturase Location: 1426-1657 bp Feature: domain Description: HNH Note: nucleases Location: 1909-2047 bp Feature: domain Description: HNH Note: nucleases Location: 1909-2047 bp Feature: gene Location: 2584-3201 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)