myRT

myRT report for GCA_008364715.1_ASM836471v1

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Seq: VTTT01000003.1 Citrobacter werkmanii strain C5.1 NODE_1_length_986112_cov_78.903544, whole genome shotgun sequence (986112 bp)
Overview 1 RT 1: 206868-210782 bp Neighborhood of RT #1 [206868, 210782] RVT-Retrons Feature: gene Location: 206868-207389 bp Feature: gene Location: 207496-207708 bp Feature: gene Location: 207896-209665 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 208055-208676 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 208055-208676 bp Feature: gene Location: 209643-209828 bp Feature: gene Location: 210096-210782 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: VTTT01000037.1 Citrobacter werkmanii strain C5.1 NODE_6_length_366594_cov_79.796906, whole genome shotgun sequence (366594 bp)
Overview 1 RT 1: 345076-349788 bp Neighborhood of RT #1 [345076, 349853] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 345076-346527 bp Feature: gene Location: 346696-347142 bp Feature: domain Description: PHA02517 Location: 346699-347140 bp Feature: domain Description: PHA02 517 Location: 346699-347140 bp Feature: gene Location: 347259-348782 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347532-348264 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 347532 -3482 64 bp Feature: domain Description: GIIM Note: maturase Location: 348339-348537 bp Feature: domain Description: GIIM Note: maturase Location: 348339-348537 bp Feature: gene Location: 348736-349161 bp Feature: gene Location: 349374-349853 bp Feature: domain Description: PHA02517 Location: 349434-349788 bp Feature: domain Description: PHA02 517 Location: 349434-349788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: VTTT01000038.1 Citrobacter werkmanii strain C5.1 NODE_7_length_321664_cov_80.039569, whole genome shotgun sequence (321664 bp)
Overview 1 RT 1: 12468-18043 bp Neighborhood of RT #1 [12468, 18150] RVT-UG5 nitrilase AbiEi_3_N AbiEi_3 AbiEii Feature: gene Location: 12468-12647 bp Feature: gene Location: 12692-12832 bp Feature: gene Location: 12971-16186 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13502-13991 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 13 502-13 991 bp Feature: domain Description: nitrilase Location: 15500-16097 bp Feature: domain Description: nitrilase Location: 15500-16097 bp Feature: gene Location: 16452-17234 bp Feature: domain Description: AbiEi_3_N Location: 16458-16725 bp Feature: domain Description: AbiEi_3 _N Location: 16458-16725 bp Feature: domain Description: AbiEi_3 Location: 16740-17193 bp Feature: domain Description: AbiEi_3 Location: 16740-17193 bp Feature: gene Location: 17221-18150 bp Feature: domain Description: AbiEii Location: 17260-18043 bp Feature: domain Description: AbiEii Location: 17260-18043 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), AbiEi_3_N (pfam17194), AbiEi_3 (pfam11459), AbiEii (pfam08843)