myRT

myRT report for GCA_008364795.1_ASM836479v1

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Seq: VTTM01000013.1 Azospirillum oryzae strain COC8 NODE_13_length_182769, whole genome shotgun sequence (182769 bp)
Overview 1 RT 1: 114790-119589 bp 2 RT 2: 128695-134679 bp Neighborhood of RT #1 [114790, 119589] COG3464 RVT_N RVT-GII GIIM HNHc COG3464 Neighborhood of RT #2 [128695, 135014] COG3464 RVT_N RVT-GII GIIM HNHc COG3464 rve Mu-transpos_C Feature: gene Location: 114790-115113 bp Feature: gene Location: 115284-116087 bp Feature: domain Description: COG3464 Location: 115446-116079 bp Feature: domain Description: COG3464 Location: 1 1 5446-1 1 6079 bp Feature: gene Location: 116274-117941 bp Feature: RT Description: RVT_N Location: 116322-116568 bp Feature: RT Description: RVT_N Location: 1 1 6322-1 1 6568 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 116613-117273 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 661 3-1 1 7273 bp Feature: domain Description: GIIM Note: maturase Location: 117333-117558 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 7333-1 1 7558 bp Feature: domain Description: HNHc Note: nucleases Location: 117732-117909 bp Feature: domain Description: HNHc Note: nucleases Location: 1 1 7732-1 1 7909 bp Feature: gene Location: 118542-119246 bp Feature: domain Description: COG3464 Location: 118605-119241 bp Feature: domain Description: COG3464 Location: 1 1 8605-1 1 9241 bp Feature: gene Location: 119356-119589 bp Feature: gene Location: 128695-128895 bp Feature: gene Location: 128936-129838 bp Feature: domain Description: COG3464 Location: 129098-129827 bp Feature: domain Description: COG3464 Location: 1 29098-1 29827 bp Feature: gene Location: 129926-131593 bp Feature: RT Description: RVT_N Location: 129974-130220 bp Feature: RT Description: RVT_N Location: 1 29974-1 30220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 130265-130925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 30265-1 30925 bp Feature: domain Description: GIIM Note: maturase Location: 130985-131210 bp Feature: domain Description: GIIM Note: maturase Location: 1 30985-1 31 21 0 bp Feature: domain Description: HNHc Note: nucleases Location: 131384-131561 bp Feature: domain Description: HNHc Note: nucleases Location: 1 31 384-1 31 561 bp Feature: gene Location: 132194-132667 bp Feature: domain Description: COG3464 Location: 132368-132662 bp Feature: domain Description: COG3464 Location: 1 32368-1 32662 bp Feature: gene Location: 133332-135014 bp Feature: domain Description: rve Location: 133854-134268 bp Feature: domain Description: rve Location: 1 33854-1 34268 bp Feature: domain Description: Mu-transpos_C Location: 134508-134679 bp Feature: domain Description: Mu-transpos_C Location: 1 34508-1 34679 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3464 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), rve (pfam00665), Mu-transpos_C (pfam09299)