myRT

myRT report for GCA_008365165.1_ASM836516v1

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Seq: VTVY01000013.1 Escherichia coli strain RF7A NODE_13_length_31970_cov_38.9777, whole genome shotgun sequence (31970 bp)
Overview 1 RT 1: 9046-12928 bp Neighborhood of RT #1 [9046, 12933] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 9046-9762 bp Feature: domain Description: rph Location: 9049-9757 bp Feature: domain Description: rph Location: 9049-9757 bp Feature: gene Location: 9813-10469 bp Feature: domain Description: pyrE Location: 9831-10464 bp Feature: domain Description: pyrE Location: 9831 -1 0464 bp Feature: gene Location: 10767-11726 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10902-11451 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 0902-1 1 451 bp Feature: gene Location: 11772-12368 bp Feature: domain Description: slmA Location: 11778-12354 bp Feature: domain Description: slmA Location: 1 1 778-1 2354 bp Feature: gene Location: 12475-12933 bp Feature: domain Description: dut Location: 12481-12928 bp Feature: domain Description: dut Location: 1 2481 -1 2928 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: VTVY01000284.1 Escherichia coli strain RF7A NODE_284_length_5208_cov_68.4599, whole genome shotgun sequence (5208 bp)
Overview 1 RT 1: 2566-5207 bp Neighborhood of RT #1 [2566, 5207] RVT-UG17 SLATT_5 Feature: gene Location: 2566-2703 bp Feature: gene Location: 2719-2853 bp Feature: gene Location: 2961-4331 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3189-3795 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 3189-3795 bp Feature: gene Location: 4309-4860 bp Feature: domain Description: SLATT_5 Location: 4315-4831 bp Feature: domain Description: SLATT_5 Location: 4315-4831 bp Feature: gene Location: 4971-5207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17, SLATT_5 (pfam18160)