myRT

myRT report for GCA_008368555.1_ASM836855v1

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Seq: SHNZ01000026.1 Enterobacter hormaechei strain s30833 contig26, whole genome shotgun sequence (15026 bp)
Overview 1 RT 1: 501-3657 bp Neighborhood of RT #1 [501, 3674] DDE_Tnp_IS1 InsA RVT-GII PRK10276 Feature: gene Location: 501-878 bp Feature: domain Description: DDE_Tnp_IS1 Location: 504-876 bp Feature: domain Description: DDE_Tnp_IS1 Location: 504-876 bp Feature: gene Location: 923-1198 bp Feature: domain Description: InsA Location: 926-1190 bp Feature: domain Description: InsA Location: 926-1 1 90 bp Feature: gene Location: 1350-2360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1356-1968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 356-1 968 bp Feature: gene Location: 2472-2837 bp Feature: gene Location: 2862-3674 bp Feature: domain Description: PRK10276 Location: 3294-3657 bp Feature: domain Description: PRK1 0276 Location: 3294-3657 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), DDE_Tnp_IS1 (pfam03400), InsA (COG3677)

Seq: SHNZ01000032.1 Enterobacter hormaechei strain s30833 contig32, whole genome shotgun sequence (37399 bp)
Overview 1 RT 1: 5485-9998 bp Neighborhood of RT #1 [5485, 10006] PRK09678 Psu RVT-Retrons PRK09692 Feature: gene Location: 5485-5730 bp Feature: domain Description: PRK09678 Location: 5488-5674 bp Feature: domain Description: PRK09678 Location: 5488-5674 bp Feature: gene Location: 5747-6313 bp Feature: domain Description: Psu Location: 5765-6308 bp Feature: domain Description: Psu Location: 5765-6308 bp Feature: gene Location: 6656-7603 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6758-7349 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6758-7349 bp Feature: gene Location: 7600-8598 bp Feature: gene Location: 8816-10006 bp Feature: domain Description: PRK09692 Location: 8819-9998 bp Feature: domain Description: PRK09692 Location: 8819-9998 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), Psu (pfam07455), RVT-Retrons, PRK09692 (Integrase; provisional)

Seq: SHNZ01000064.1 Enterobacter hormaechei strain s30833 contig64, whole genome shotgun sequence (10050 bp)
Overview 1 RT 1: 161-3242 bp Neighborhood of RT #1 [161, 3250] RVT-GII GIIM PHA02517 APH Feature: gene Location: 161-1684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 434-1166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43 4-1166 bp Feature: domain Description: GIIM Note: maturase Location: 1241-1439 bp Feature: domain Description: GIIM Note: maturase Location: 1241-143 9 bp Feature: gene Location: 1810-2241 bp Feature: domain Description: PHA02517 Location: 1816-2215 bp Feature: domain Description: PHA02517 Location: 1816-2215 bp Feature: gene Location: 2420-3250 bp Feature: domain Description: APH Location: 2489-3242 bp Feature: domain Description: APH Location: 2489-3 242 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), APH (pfam01636)