myRT

myRT report for GCA_008369935.1_ASM836993v1

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Seq: VTUZ01000105.1 Paraburkholderia sp. DCY113 contig105, whole genome shotgun sequence (6611 bp) Associated domains: RVT-GII, PinE (COG1961), Zn_ribbon_recom (pfam13408), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182)

Seq: VTUZ01000127.1 Paraburkholderia sp. DCY113 contig127, whole genome shotgun sequence (1927 bp) Associated domains: RVT-GII

Seq: VTUZ01000128.1 Paraburkholderia sp. DCY113 contig128, whole genome shotgun sequence (1885 bp) Associated domains: RVT-GII, GIIM (pfam08388)

Seq: VTUZ01000014.1 Paraburkholderia sp. DCY113 contig14, whole genome shotgun sequence (219503 bp) Associated domains: DUF3579 (pfam12112), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK00779 (ornithine carbamoyltransferase; Provisional), PLN00200 (argininosuccinate synthase; Provisional), PglL_A (pfam15864), Wzy_C (pfam04932), Wzy_C_2 (pfam11846)
YkfC (COG3344), HNH (pfam01844), PilA (COG4969), R_switched_YjbE (TIGR03717)

Seq: VTUZ01000024.1 Paraburkholderia sp. DCY113 contig24, whole genome shotgun sequence (140460 bp) Associated domains: Barstar (pfam01337), RNase_Sa (cd00607), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK12861 (malic enzyme; Reviewed), PRK05731 (thiamine monophosphate kinase; Provisional), argJ (PRK05388), PRK12904 (preprotein translocase subunit SecA; Reviewed)
DciA, LpxC (pfam03331)

Seq: VTUZ01000025.1 Paraburkholderia sp. DCY113 contig25, whole genome shotgun sequence (137994 bp) Associated domains: RVT-Retrons, Trypsin_2 (pfam13365), DUF932 (pfam06067)

Seq: VTUZ01000027.1 Paraburkholderia sp. DCY113 contig27, whole genome shotgun sequence (135929 bp) Associated domains: PssA (COG1183), PRK05305 (phosphatidylserine decarboxylase family protein), RVT-GII, GIIM (pfam08388), HNHc (smart00507), PRK05479 (ketol-acid reductoisomerase; Provisional), ilvH (PRK11895)

Seq: VTUZ01000003.1 Paraburkholderia sp. DCY113 contig3, whole genome shotgun sequence (465364 bp) Associated domains: Phage_int_SAM_4 (pfam13495), RVT-GII, GIIM (pfam08388), AcrR (COG1309), SDR_a7 (cd05262)

Seq: VTUZ01000034.1 Paraburkholderia sp. DCY113 contig34, whole genome shotgun sequence (115386 bp) Associated domains: RVT-GII, PRK15098 (beta-glucosidase BglX), NmrA_TMR_like_1_SDR_a (cd05231), PadR (pfam03551), GIIM (pfam08388), DDE_Tnp_1_6 (pfam13751)

Seq: VTUZ01000005.1 Paraburkholderia sp. DCY113 contig5, whole genome shotgun sequence (387581 bp) Associated domains: DDE_Tnp_1_6 (pfam13751), RVT-GII, PRK11465 (putative mechanosensitive channel protein; Provisional), Ion_trans_2 (pfam07885), DUF2955 (pfam11168)

Seq: VTUZ01000065.1 Paraburkholderia sp. DCY113 contig65, whole genome shotgun sequence (40948 bp) Associated domains: YrpB (COG2070), Rve (COG3316), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: VTUZ01000009.1 Paraburkholderia sp. DCY113 contig9, whole genome shotgun sequence (289787 bp) Associated domains: INT_RitB_C_like (cd00797), INT_RitC_C_like (cd01182), RVT-GII, GIIM (pfam08388), MFS_Set (cd17471)

Seq: VTUZ01000092.1 Paraburkholderia sp. DCY113 contig92, whole genome shotgun sequence (14079 bp) Associated domains: AcpA (cd16013), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)