myRT

myRT report for GCA_008370015.1_ASM837001v1

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Seq: VOBL01000001.1 Paeniglutamicibacter gangotriensis strain ANT_H27 ctg00001_404010, whole genome shotgun sequence (404010 bp)
Overview 1 RT 1: 281647-287896 bp Neighborhood of RT #1 [281647, 288039] CE4_BH0857_like rpsA RVT-GII GIIM Peptidases_S8_12 Feature: gene Location: 281647-282762 bp Feature: domain Description: CE4_BH0857_like Location: 282127-282682 bp Feature: domain Description: CE4_BH0857_like Location: 2821 27-282682 bp Feature: gene Location: 282925-284391 bp Feature: domain Description: rpsA Location: 282943-284386 bp Feature: domain Description: rpsA Location: 282943-284386 bp Feature: gene Location: 284892-286313 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285249-285864 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 285249-285864 bp Feature: domain Description: GIIM Note: maturase Location: 285921-286146 bp Feature: domain Description: GIIM Note: maturase Location: 285921 -2861 46 bp Feature: gene Location: 286470-287201 bp Feature: gene Location: 286729-288039 bp Feature: domain Description: Peptidases_S8_12 Location: 287143-287896 bp Feature: domain Description: Peptidases_S8_1 2 Location: 2871 43-287896 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CE4_BH0857_like (cd10955), rpsA (TIGR00717), RVT-GII, GIIM (pfam08388), Peptidases_S8_12 (cd07480)

Seq: VOBL01000006.1 Paeniglutamicibacter gangotriensis strain ANT_H27 ctg00006_245165, whole genome shotgun sequence (245165 bp)
Overview 1 RT 1: 221068-226311 bp Neighborhood of RT #1 [221068, 226346] SsuD Flavin_utilizing_monoxygenases RVT-Retrons nifR3_yhdG PRK03007 Feature: gene Location: 221068-221211 bp Feature: domain Description: SsuD Location: 221071-221209 bp Feature: domain Description: SsuD Location: 2 2 1071-2 2 12 09 bp Feature: gene Location: 221268-221408 bp Feature: domain Description: Flavin_utilizing_monoxygenases Location: 221283-221406 bp Feature: domain Description: Flavin_utilizing_monoxygenases Location: 2 2 12 83-2 2 1406 bp Feature: gene Location: 221900-223285 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 222425-223058 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 2 2 42 5-2 2 3058 bp Feature: gene Location: 223858-225054 bp Feature: domain Description: nifR3_yhdG Location: 223936-224893 bp Feature: domain Description: nifR3_yhdG Location: 2 2 3936-2 2 4893 bp Feature: gene Location: 225066-226346 bp Feature: domain Description: PRK03007 Location: 225081-226311 bp Feature: domain Description: PRK03007 Location: 2 2 5081-2 2 6311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SsuD (COG2141), Flavin_utilizing_monoxygenases (cl19096), RVT-Retrons, nifR3_yhdG (TIGR00737), PRK03007 (deoxyguanosinetriphosphate triphosphohydrolase-like protein; Provisional)

Seq: VOBL01000009.1 Paeniglutamicibacter gangotriensis strain ANT_H27 ctg00009_160013, whole genome shotgun sequence (160013 bp)
Overview 1 RT 1: 53923-62850 bp Neighborhood of RT #1 [53923, 62933] CcmA RVT-GII GIIM pepN_strep_liv YdfJ YdfJ Feature: gene Location: 53923-54822 bp Feature: domain Description: CcmA Location: 53926-54598 bp Feature: domain Description: CcmA Location: 53 926-54598 bp Feature: gene Location: 54819-55529 bp Feature: gene Location: 56015-57436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 56372-56987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 563 72-56987 bp Feature: domain Description: GIIM Note: maturase Location: 57044-57269 bp Feature: domain Description: GIIM Note: maturase Location: 57044-57269 bp Feature: gene Location: 57529-60252 bp Feature: domain Description: pepN_strep_liv Location: 57628-60220 bp Feature: domain Description: pepN_strep_liv Location: 57628-60220 bp Feature: gene Location: 60348-62933 bp Feature: domain Description: YdfJ Location: 60381-60855 bp Feature: domain Description: YdfJ Location: 603 81-60855 bp Feature: domain Description: YdfJ Location: 61239-62850 bp Feature: domain Description: YdfJ Location: 6123 9-62850 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CcmA (COG4133), RVT-GII, GIIM (pfam08388), pepN_strep_liv (TIGR02412), YdfJ (COG2409)

Seq: VOBL01000011.1 Paeniglutamicibacter gangotriensis strain ANT_H27 ctg00011_143610, whole genome shotgun sequence (143610 bp)
Overview 1 RT 1: 50280-55939 bp Neighborhood of RT #1 [50280, 55944] InsQ RVT-GII GIIM PRK00555 Feature: gene Location: 50280-51812 bp Feature: domain Description: InsQ Location: 51057-51651 bp Feature: domain Description: InsQ Location: 51057-51651 bp Feature: gene Location: 51942-52076 bp Feature: gene Location: 52574-53995 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52931-53546 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52931-5354 6 bp Feature: domain Description: GIIM Note: maturase Location: 53603-53828 bp Feature: domain Description: GIIM Note: maturase Location: 53603-53828 bp Feature: gene Location: 54086-54508 bp Feature: gene Location: 54784-55944 bp Feature: domain Description: PRK00555 Location: 54859-55939 bp Feature: domain Description: PRK00555 Location: 54 859-55939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), PRK00555 (galactokinase; Provisional)