myRT

myRT report for GCA_008370645.1_ASM837064v1

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Seq: VTZN01000001.1 Mycobacterium simiae strain JAL-560-SIM, whole genome shotgun sequence (143232 bp)
Overview 1 RT 1: 103183-107839 bp Neighborhood of RT #1 [103183, 107839] AcyC gcvT RVT-GII GIIM Feature: gene Location: 103183-104313 bp Feature: domain Description: AcyC Location: 103315-104284 bp Feature: domain Description: AcyC Location: 1 0331 5-1 04284 bp Feature: gene Location: 104358-105461 bp Feature: domain Description: gcvT Location: 104382-105453 bp Feature: domain Description: gcvT Location: 1 04382-1 05453 bp Feature: gene Location: 105735-107258 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106374-106998 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06374-1 06998 bp Feature: domain Description: GIIM Note: maturase Location: 107091-107253 bp Feature: domain Description: GIIM Note: maturase Location: 1 07091 -1 07253 bp Feature: gene Location: 107349-107567 bp Feature: gene Location: 107600-107839 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AcyC (COG2114), gcvT (TIGR00528), RVT-GII, GIIM (pfam08388)

Seq: VTZN01000041.1 Mycobacterium simiae strain JAL-560-SIM, whole genome shotgun sequence (32899 bp)
Overview 1 RT 1: 8178-11287 bp Neighborhood of RT #1 [8178, 11448] ksgA RVT-GII GT_2_WfgS_like fkbM_fam Feature: gene Location: 8178-9017 bp Feature: domain Description: ksgA Location: 8502-8712 bp Feature: domain Description: ksgA Location: 8502 -8712 bp Feature: gene Location: 9044-9247 bp Feature: gene Location: 9587-9958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9614-9836 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9614-9836 bp Feature: gene Location: 10182-10934 bp Feature: domain Description: GT_2_WfgS_like Location: 10203-10803 bp Feature: domain Description: GT_2 _WfgS_like Location: 102 03-10803 bp Feature: gene Location: 11074-11448 bp Feature: domain Description: fkbM_fam Location: 11104-11287 bp Feature: domain Description: fkbM_fam Location: 11104-112 87 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ksgA (TIGR00755), RVT-GII, GT_2_WfgS_like (cd06433), fkbM_fam (TIGR01444)

Seq: VTZN01000060.1 Mycobacterium simiae strain JAL-560-SIM, whole genome shotgun sequence (26794 bp)
Overview 1 RT 1: 14667-20779 bp Neighborhood of RT #1 [14667, 20784] BaeS OmpR RVT-GII GIIM AccD PRK05724 PRK07854 Feature: gene Location: 14667-16007 bp Feature: domain Description: BaeS Location: 15018-16002 bp Feature: domain Description: BaeS Location: 15018-16002 bp Feature: gene Location: 16008-16709 bp Feature: domain Description: OmpR Location: 16035-16701 bp Feature: domain Description: OmpR Location: 1603 5-16701 bp Feature: gene Location: 17251-18519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17587-18202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17587-18202 bp Feature: domain Description: GIIM Note: maturase Location: 18259-18466 bp Feature: domain Description: GIIM Note: maturase Location: 18259-18466 bp Feature: gene Location: 18536-20026 bp Feature: domain Description: AccD Location: 18542-19217 bp Feature: domain Description: AccD Location: 18542-19217 bp Feature: domain Description: PRK05724 Location: 19256-20009 bp Feature: domain Description: PRK05724 Location: 19256-20009 bp Feature: gene Location: 20053-20784 bp Feature: domain Description: PRK07854 Location: 20056-20779 bp Feature: domain Description: PRK07854 Location: 20056-20779 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BaeS (COG0642), OmpR (COG0745), RVT-GII, GIIM (pfam08388), AccD (COG0777), PRK05724 (acetyl-CoA carboxylase carboxyltransferase subunit alpha; Validated), PRK07854 (enoyl-CoA hydratase; Provisional)