myRT

myRT report for GCA_008373425.1_ASM837342v1

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Seq: VUDS01000011.1 Escherichia coli strain EcFF171 NODE_11_length_159276_cov_43.4543, whole genome shotgun sequence (159276 bp)
Overview 1 RT 1: 71934-74662 bp Neighborhood of RT #1 [71934, 74662] YhhI YhhI IS285 RVT-GII Feature: gene Location: 71934-72785 bp Feature: domain Description: YhhI Location: 71937-72297 bp Feature: domain Description: YhhI Location: 71 937-72297 bp Feature: domain Description: YhhI Location: 72357-72711 bp Feature: domain Description: YhhI Location: 72357-7271 1 bp Feature: gene Location: 72889-73647 bp Feature: domain Description: IS285 Location: 72919-73609 bp Feature: domain Description: IS285 Location: 7291 9-73609 bp Feature: gene Location: 73696-73989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73867-73975 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73867-73975 bp Feature: gene Location: 74050-74271 bp Feature: gene Location: 74414-74662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), IS285 (COG3328), RVT-GII

Seq: VUDS01000013.1 Escherichia coli strain EcFF171 NODE_13_length_142816_cov_51.9352, whole genome shotgun sequence (142816 bp)
Overview 1 RT 1: 86281-90163 bp Neighborhood of RT #1 [86281, 90168] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 86281-86997 bp Feature: domain Description: rph Location: 86284-86992 bp Feature: domain Description: rph Location: 862 84-86992 bp Feature: gene Location: 87048-87704 bp Feature: domain Description: pyrE Location: 87066-87699 bp Feature: domain Description: pyrE Location: 87066-87699 bp Feature: gene Location: 88002-88961 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88137-88686 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 88137-88686 bp Feature: gene Location: 89007-89603 bp Feature: domain Description: slmA Location: 89013-89589 bp Feature: domain Description: slmA Location: 89013-89589 bp Feature: gene Location: 89710-90168 bp Feature: domain Description: dut Location: 89716-90163 bp Feature: domain Description: dut Location: 89716-90163 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)