myRT

myRT report for GCA_008373465.1_ASM837346v1

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Seq: VUDU01000019.1 Escherichia coli strain EcFF071 NODE_19_length_80896_cov_44.9363, whole genome shotgun sequence (80896 bp)
Overview 1 RT 1: 53892-60267 bp Neighborhood of RT #1 [53892, 60290] Psu PRK09678 RVT-UG3 RVT-UG8 PBP2_CrgA_like_5 XdhC Feature: gene Location: 53892-54443 bp Feature: domain Description: Psu Location: 53913-54423 bp Feature: domain Description: Psu Location: 5391 3-54423 bp Feature: gene Location: 54449-54721 bp Feature: domain Description: PRK09678 Location: 54458-54623 bp Feature: domain Description: PRK09678 Location: 54458-54623 bp Feature: gene Location: 55116-56393 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 55404-55899 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 55404-55899 bp Feature: gene Location: 56384-58402 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 56957-57410 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 56957-5741 0 bp Feature: gene Location: 58945-59355 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 59017-59329 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 5901 7-59329 bp Feature: gene Location: 59334-60290 bp Feature: domain Description: XdhC Location: 59412-60267 bp Feature: domain Description: XdhC Location: 5941 2-60267 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG3, RVT-UG8, PBP2_CrgA_like_5 (cd08474), XdhC (COG1975)

Seq: VUDU01000037.1 Escherichia coli strain EcFF071 NODE_37_length_29874_cov_48.4794, whole genome shotgun sequence (29874 bp)
Overview 1 RT 1: 11208-14914 bp Neighborhood of RT #1 [11208, 14919] RVT-GII RVT-GII GIIM LacI PBP1_GntR Feature: gene Location: 11208-11339 bp Feature: gene Location: 11737-11934 bp Feature: gene Location: 12103-12537 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12295-12511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 95-12 511 bp Feature: gene Location: 12510-13163 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12513-12921 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 513-12 92 1 bp Feature: domain Description: GIIM Note: maturase Location: 12969-13161 bp Feature: domain Description: GIIM Note: maturase Location: 12 969-13161 bp Feature: gene Location: 13539-13757 bp Feature: gene Location: 13888-14919 bp Feature: domain Description: LacI Location: 13930-14065 bp Feature: domain Description: LacI Location: 13930-14065 bp Feature: domain Description: PBP1_GntR Location: 14104-14914 bp Feature: domain Description: PBP1_GntR Location: 14104-14914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LacI (pfam00356), PBP1_GntR (cd01575)