myRT

myRT report for GCA_008374035.1_ASM837403v1

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Seq: VUEI01000009.1 Escherichia coli strain EcFF303 NODE_9_length_170773_cov_53.4508, whole genome shotgun sequence (170773 bp)
Overview 1 RT 1: 23014-26051 bp 2 RT 2: 142118-146614 bp Neighborhood of RT #1 [23014, 26116] SLATT_5 RVT-UG17 COG4733 Neighborhood of RT #2 [142118, 146679] deoxyribose_mutarotase PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 23014-23154 bp Feature: gene Location: 23167-23718 bp Feature: domain Description: SLATT_5 Location: 23173-23689 bp Feature: domain Description: SLATT_5 Location: 231 73-23689 bp Feature: gene Location: 23696-25066 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 23924-24530 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 23924-24530 bp Feature: gene Location: 25174-25308 bp Feature: gene Location: 25547-26116 bp Feature: domain Description: COG4733 Location: 25550-26051 bp Feature: domain Description: COG4733 Location: 25550-26051 bp Feature: gene Location: 142118-143131 bp Feature: domain Description: deoxyribose_mutarotase Location: 142259-143123 bp Feature: domain Description: deoxyribose_mutarotase Location: 1 42259-1 431 23 bp Feature: gene Location: 143357-143731 bp Feature: domain Description: PHA02517 Location: 143360-143720 bp Feature: domain Description: PHA0251 7 Location: 1 43360-1 43720 bp Feature: gene Location: 143926-145449 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144199-144931 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 441 99-1 44931 bp Feature: domain Description: GIIM Note: maturase Location: 145006-145204 bp Feature: domain Description: GIIM Note: maturase Location: 1 45006-1 45204 bp Feature: gene Location: 145403-145828 bp Feature: gene Location: 146041-146679 bp Feature: domain Description: PHA02517 Location: 146278-146614 bp Feature: domain Description: PHA0251 7 Location: 1 46278-1 4661 4 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, COG4733 (Phage-related protein, tail component ), deoxyribose_mutarotase (cd09269), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)