myRT

myRT report for GCA_008374465.1_ASM837446v1

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Seq: VUBV01000009.1 Klebsiella pneumoniae strain 189B3 contig_0009, whole genome shotgun sequence (272883 bp)
Overview 1 RT 1: 31777-38630 bp Neighborhood of RT #1 [31777, 38647] INT_P4_C Integrase_1 RVT-UG4 FimD FimC Feature: gene Location: 31777-32442 bp Feature: domain Description: INT_P4_C Location: 31882-32440 bp Feature: domain Description: INT_P4_C Location: 31 882-32440 bp Feature: gene Location: 32703-33143 bp Feature: domain Description: Integrase_1 Location: 32709-32925 bp Feature: domain Description: Integrase_1 Location: 32709-32925 bp Feature: gene Location: 33200-35278 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33608-34052 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 33608-34052 bp Feature: gene Location: 35278-37887 bp Feature: domain Description: FimD Location: 35335-37876 bp Feature: domain Description: FimD Location: 35335-37876 bp Feature: gene Location: 37919-38647 bp Feature: domain Description: FimC Location: 37952-38630 bp Feature: domain Description: FimC Location: 37952-38630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_P4_C (cd00801), Integrase_1 (pfam12835), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: VUBV01000020.1 Klebsiella pneumoniae strain 189B3 contig_0020, whole genome shotgun sequence (147382 bp)
Overview 1 RT 1: 143443-146188 bp Neighborhood of RT #1 [143443, 146188] PRK10276 RVT-GII Feature: gene Location: 143443-143811 bp Feature: domain Description: PRK10276 Location: 143488-143611 bp Feature: domain Description: PRK102 76 Location: 143488-143611 bp Feature: gene Location: 143768-144007 bp Feature: gene Location: 144083-145567 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144485-145175 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 144485-145175 bp Feature: gene Location: 145576-145743 bp Feature: gene Location: 145973-146188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: VUBV01000043.1 Klebsiella pneumoniae strain 189B3 contig_0043, whole genome shotgun sequence (25240 bp)
Overview 1 RT 1: 17253-20437 bp Neighborhood of RT #1 [17253, 20437] PRK10276 RVT-GII Feature: gene Location: 17253-17678 bp Feature: domain Description: PRK10276 Location: 17256-17664 bp Feature: domain Description: PRK10276 Location: 17256-17664 bp Feature: gene Location: 17796-18029 bp Feature: gene Location: 18080-19591 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18485-19199 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18485-19199 bp Feature: gene Location: 19825-20055 bp Feature: gene Location: 20114-20437 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: VUBV01000049.1 Klebsiella pneumoniae strain 189B3 contig_0049, whole genome shotgun sequence (11299 bp)
Overview 1 RT 1: 1-2760 bp Neighborhood of RT #1 [1, 2762] RVT-UG5 COG3440 GlgS Feature: gene Location: 1-1479 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 499-961 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 4 99-961 bp Feature: gene Location: 1651-2523 bp Feature: domain Description: COG3440 Location: 1669-2515 bp Feature: domain Description: COG34 4 0 Location: 1669-2515 bp Feature: gene Location: 2562-2762 bp Feature: domain Description: GlgS Location: 2565-2760 bp Feature: domain Description: GlgS Location: 2565-2760 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, COG3440 (Predicted restriction endonuclease ), GlgS (pfam08971)