myRT

myRT report for GCA_008385585.1_ASM838558v1

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Seq: REBC01000040.1 Escherichia coli strain EC7_ST144C scaffold_39, whole genome shotgun sequence (16383 bp)
Overview 1 RT 1: 3-3338 bp Neighborhood of RT #1 [3, 3349] RVT-GII Intron_maturas2 HNHc DUF932 DUF905 Feature: gene Location: 3-185 bp Feature: gene Location: 358-2136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 619-1414 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 61 9-1 41 4 bp Feature: domain Description: Intron_maturas2 Location: 1540-1765 bp Feature: domain Description: Intron_maturas2 Location: 1 540-1 765 bp Feature: domain Description: HNHc Note: nucleases Location: 1960-2110 bp Feature: domain Description: HNHc Note: nucleases Location: 1 960-21 1 0 bp Feature: gene Location: 2628-3026 bp Feature: domain Description: DUF932 Location: 2736-3018 bp Feature: domain Description: DUF932 Location: 2736-301 8 bp Feature: gene Location: 3116-3349 bp Feature: domain Description: DUF905 Location: 3140-3338 bp Feature: domain Description: DUF905 Location: 31 40-3338 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF932 (pfam06067), DUF905 (pfam06006), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: REBC01000064.1 Escherichia coli strain EC7_ST144C scaffold_63, whole genome shotgun sequence (6699 bp)
Overview 1 RT 1: 3805-6362 bp Neighborhood of RT #1 [3805, 6607] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 3805-4077 bp Feature: domain Description: InsE Location: 3814-4063 bp Feature: domain Description: InsE Location: 3814-4063 bp Feature: gene Location: 4133-4558 bp Feature: domain Description: PHA02517 Location: 4157-4493 bp Feature: domain Description: PHA02 517 Location: 4157-4493 bp Feature: gene Location: 5084-6607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5357-6089 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5357-6089 bp Feature: domain Description: GIIM Note: maturase Location: 6164-6362 bp Feature: domain Description: GIIM Note: maturase Location: 6164-6362 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)