myRT

myRT report for GCA_008385635.1_ASM838563v1

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Seq: REBE01000109.1 Escherichia coli strain EC393_ST131C scaffold_108, whole genome shotgun sequence (985 bp)
Overview 1 RT 1: 3-982 bp Neighborhood of RT #1 [3, 982] RVT-GII Feature: gene Location: 3-329 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-330 bp Feature: gene Location: 623-982 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: REBE01000014.1 Escherichia coli strain EC393_ST131C scaffold_13, whole genome shotgun sequence (118965 bp)
Overview 1 RT 1: 65264-69205 bp Neighborhood of RT #1 [65264, 69205] RVT-Retrons Feature: gene Location: 65264-66403 bp Feature: gene Location: 66449-66616 bp Feature: gene Location: 66638-68410 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66797-67415 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 66797-67415 bp Feature: gene Location: 68631-68774 bp Feature: gene Location: 68966-69205 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: REBE01000037.1 Escherichia coli strain EC393_ST131C scaffold_36, whole genome shotgun sequence (43567 bp)
Overview 1 RT 1: 5436-9727 bp Neighborhood of RT #1 [5436, 9727] YesM RVT-GII GIIM RVT-GII Feature: gene Location: 5436-6698 bp Feature: domain Description: YesM Location: 5949-6690 bp Feature: domain Description: YesM Location: 5949-6690 bp Feature: gene Location: 6728-6898 bp Feature: gene Location: 7248-7769 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7254-7536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7254-753 6 bp Feature: domain Description: GIIM Note: maturase Location: 7584-7764 bp Feature: domain Description: GIIM Note: maturase Location: 7584-7764 bp Feature: gene Location: 7797-8336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8127-8205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8127-8205 bp Feature: gene Location: 8367-8564 bp Feature: gene Location: 8822-9727 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YesM (COG2972), RVT-GII, GIIM (pfam08388)

Seq: REBE01000048.1 Escherichia coli strain EC393_ST131C scaffold_47, whole genome shotgun sequence (14557 bp)
Overview 1 RT 1: 2-1073 bp Neighborhood of RT #1 [2, 1081] RVT-GII PRK10173 PRK10173 Feature: gene Location: 2-298 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68-137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68-137 bp Feature: gene Location: 337-648 bp Feature: domain Description: PRK10173 Location: 340-559 bp Feature: domain Description: PRK10173 Location: 34 0-559 bp Feature: gene Location: 632-1081 bp Feature: domain Description: PRK10173 Location: 635-1073 bp Feature: domain Description: PRK10173 Location: 635-1073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, PRK10173 (glucose-1-phosphatase/inositol phosphatase; Provisional)

Seq: REBE01000050.1 Escherichia coli strain EC393_ST131C scaffold_49, whole genome shotgun sequence (11831 bp)
Overview 1 RT 1: 7009-9791 bp Neighborhood of RT #1 [7009, 11140] GerD RVT-UG1 Feature: gene Location: 7009-7443 bp Feature: domain Description: GerD Location: 7087-7201 bp Feature: domain Description: GerD Location: 7087-7201 bp Feature: gene Location: 7452-8567 bp Feature: gene Location: 8669-11140 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 9281-9791 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 9281-9791 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GerD (pfam17898), RVT-UG1

Seq: REBE01000092.1 Escherichia coli strain EC393_ST131C scaffold_91, whole genome shotgun sequence (1424 bp)
Overview 1 RT 1: 107-1178 bp Neighborhood of RT #1 [107, 1423] RVT-GII GIIM Feature: gene Location: 107-1423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-905 bp Feature: domain Description: GIIM Note: maturase Location: 980-1178 bp Feature: domain Description: GIIM Note: maturase Location: 980-1178 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)