myRT

myRT report for GCA_008386495.1_ASM838649v1

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Seq: VTHJ01000162.1 Streptomyces sp. TRM68348 scaffold162, whole genome shotgun sequence (2505 bp)
Overview 1 RT 1: 3-2378 bp Neighborhood of RT #1 [3, 2431] RVT_N RVT-GII GIIM HNH Feature: gene Location: 3-131 bp Feature: gene Location: 650-2431 bp Feature: domain Description: RVT_N Location: 728-971 bp Feature: domain Description: RVT_N Location: 728-971 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1022-1667 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 022-1 667 bp Feature: domain Description: GIIM Note: maturase Location: 1721-1952 bp Feature: domain Description: GIIM Note: maturase Location: 1 721 -1 952 bp Feature: domain Description: HNH Note: nucleases Location: 2276-2378 bp Feature: domain Description: HNH Note: nucleases Location: 2276-2378 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844)

Seq: VTHJ01000019.1 Streptomyces sp. TRM68348 scaffold19, whole genome shotgun sequence (138596 bp)
Overview 1 RT 1: 83916-92293 bp Neighborhood of RT #1 [83916, 92391] glgX_debranch trehalose_TreY RVT-GII GIIM DDE_Tnp_1_6 Feature: gene Location: 83916-86042 bp Feature: domain Description: glgX_debranch Location: 83934-86031 bp Feature: domain Description: glgX_debranch Location: 83934-86031 bp Feature: gene Location: 86233-88575 bp Feature: domain Description: trehalose_TreY Location: 86251-88558 bp Feature: domain Description: trehalose_TreY Location: 862 51-88558 bp Feature: gene Location: 88898-90262 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 89237-89876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 892 37-89876 bp Feature: domain Description: GIIM Note: maturase Location: 89957-90179 bp Feature: domain Description: GIIM Note: maturase Location: 89957-90179 bp Feature: gene Location: 91229-91879 bp Feature: gene Location: 91888-92391 bp Feature: domain Description: DDE_Tnp_1_6 Location: 92116-92293 bp Feature: domain Description: DDE_Tnp_1_6 Location: 92 116-92 2 93 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT glgX_debranch (TIGR02100), trehalose_TreY (TIGR02401), RVT-GII, GIIM (pfam08388), DDE_Tnp_1_6 (pfam13751)

Seq: VTHJ01000021.1 Streptomyces sp. TRM68348 scaffold21, whole genome shotgun sequence (132739 bp)
Overview 1 RT 1: 18222-25125 bp Neighborhood of RT #1 [18222, 25127] Peptidase_S41_IRBP DDE_5 RVT-GII AmyAc_OligoGlu_TS MalG Feature: gene Location: 18222-18410 bp Feature: domain Description: Peptidase_S41_IRBP Location: 18240-18393 bp Feature: domain Description: Peptidase_S41_IRBP Location: 18240-183 93 bp Feature: gene Location: 18687-19604 bp Feature: gene Location: 20111-21286 bp Feature: domain Description: DDE_5 Location: 20153-20561 bp Feature: domain Description: DDE_5 Location: 20153 -20561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20600-21077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20600-21077 bp Feature: gene Location: 22349-24031 bp Feature: domain Description: AmyAc_OligoGlu_TS Location: 22418-23822 bp Feature: domain Description: AmyAc_OligoGlu_TS Location: 22418-23 822 bp Feature: gene Location: 24207-25127 bp Feature: domain Description: MalG Location: 24318-25125 bp Feature: domain Description: MalG Location: 243 18-25125 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S41_IRBP (cd07563), DDE_5 (pfam13546), RVT-GII, AmyAc_OligoGlu_TS (cd11332), MalG (COG3833)