myRT

myRT report for GCA_008388335.1_ASM838833v1

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Seq: RDTH01000022.1 Escherichia coli strain EC84_ST131H scaffold_21, whole genome shotgun sequence (69552 bp)
Overview 1 RT 1: 19973-23914 bp Neighborhood of RT #1 [19973, 23914] RVT-Retrons Feature: gene Location: 19973-21112 bp Feature: gene Location: 21158-21325 bp Feature: gene Location: 21347-23119 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21506-22124 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 506-221 24 bp Feature: gene Location: 23340-23483 bp Feature: gene Location: 23675-23914 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: RDTH01000050.1 Escherichia coli strain EC84_ST131H scaffold_49, whole genome shotgun sequence (11029 bp)
Overview 1 RT 1: 6691-9473 bp Neighborhood of RT #1 [6691, 10822] GerD RVT-UG1 Feature: gene Location: 6691-7125 bp Feature: domain Description: GerD Location: 6769-6883 bp Feature: domain Description: GerD Location: 6769-6883 bp Feature: gene Location: 7134-8249 bp Feature: gene Location: 8351-10822 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8963-9473 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 8963-9473 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GerD (pfam17898), RVT-UG1

Seq: RDTH01000080.1 Escherichia coli strain EC84_ST131H scaffold_79, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)