myRT

myRT report for GCA_008388505.1_ASM838850v1

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Seq: RDTL01000016.1 Escherichia coli strain EC65_ST127C scaffold_15, whole genome shotgun sequence (102446 bp)
Overview 1 RT 1: 99519-101699 bp Neighborhood of RT #1 [99519, 102352] HTH_29 HTH_33 DDE_3 RVT-AbiP2 Feature: gene Location: 99519-99809 bp Feature: gene Location: 99819-100880 bp Feature: domain Description: HTH_29 Location: 99939-100110 bp Feature: domain Description: HTH_29 Location: 99939-1 001 1 0 bp Feature: domain Description: HTH_33 Location: 100143-100305 bp Feature: domain Description: HTH_33 Location: 1 001 43-1 00305 bp Feature: domain Description: DDE_3 Location: 100347-100776 bp Feature: domain Description: DDE_3 Location: 1 00347-1 00776 bp Feature: gene Location: 100982-102352 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 101243-101699 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 1 01 243-1 01 699 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_29 (pfam13551), HTH_33 (pfam13592), DDE_3 (pfam13358), RVT-AbiP2

Seq: RDTL01000060.1 Escherichia coli strain EC65_ST127C scaffold_59, whole genome shotgun sequence (15728 bp)
Overview 1 RT 1: 9-3263 bp Neighborhood of RT #1 [9, 3997] RVT-GII GIIM rve Feature: gene Location: 9-1532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 282-1014 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 82 -1014 bp Feature: domain Description: GIIM Note: maturase Location: 1092-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1092 -12 87 bp Feature: gene Location: 1826-2197 bp Feature: gene Location: 2498-3997 bp Feature: domain Description: rve Location: 2870-3263 bp Feature: domain Description: rve Location: 2 870-32 63 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), rve (pfam00665)